RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 PPP4R4Q6NUP7 873 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 CELF5Q8N6W0 485 aaKnown RBP6.92□□□□□ -1.3
CALD1-213ENST00000462181 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 FUBP1Q96AE4 644 aaKnown RBP6.92□□□□□ -1.3
CALD1-213ENST00000462181 LRIG1Q96JA1 1093 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 NT5C1BQ96P26 610 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 TTPALQ9BTX7 342 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 CASS4Q9NQ75 786 aa6.92□□□□□ -1.3
CALD1-213ENST00000462181 COL4A3Q01955 1670 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 E7ENX8 843 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 HKR1P10072 659 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 TAP2Q03519 686 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 FSTL1Q12841 308 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 MAEAQ7L5Y9 396 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 FAM46DQ8NEK8 389 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 POC1BQ8TC44 478 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 SNX19Q92543 992 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 CAVIN3Q969G5 261 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 ZMAT3Q9HA38 289 aaKnown RBP6.91□□□□□ -1.3
CALD1-213ENST00000462181 PRDM11Q9NQV5 511 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 INTS13Q9NVM9 706 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 OBP2AQ9NY56 170 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
CALD1-213ENST00000462181 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
CALD1-213ENST00000462181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
CALD1-213ENST00000462181 FRMPD2Q68DX3 1309 aaPredicted RBP6.91□□□□□ -1.3
CALD1-213ENST00000462181 PHGDHO43175 533 aaKnown RBP6.9□□□□□ -1.3
CALD1-213ENST00000462181 SLPIP03973 132 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 FDXRP22570 491 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 TGFB2P61812 414 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 MC2RQ01718 297 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 DPTQ07507 201 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 SCAPQ12770 1279 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
CALD1-213ENST00000462181 FAM160B1Q5W0V3 765 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 MICALCLQ6ZW33 695 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 MRGPRGQ86SM5 289 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 KIAA0319LQ8IZA0 1049 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 MRGPRX1Q96LB2 322 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 Q96MF0 132 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 SORCS2Q96PQ0 1159 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 MRPS18AQ9NVS2 196 aaKnown RBP6.9□□□□□ -1.3
CALD1-213ENST00000462181 DMTF1Q9Y222 760 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 RAD54BQ9Y620 910 aa6.9□□□□□ -1.3
CALD1-213ENST00000462181 CFAP69A5D8W1 941 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 FOXN1O15353 648 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 RAMP2O60895 175 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 SOAT2O75908 522 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 UNC5CO95185 931 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 KITP10721 976 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 KRT4P19013 534 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 INHBCP55103 352 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 TCF15Q12870 199 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 GBX1Q14549 363 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 GRM3Q14832 879 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 CNN3Q15417 329 aaKnown RBP6.89□□□□□ -1.31
CALD1-213ENST00000462181 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 Q6YL49 198 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 Q6ZPA2 131 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 SRGAP1Q7Z6B7 1085 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 ADGRG5Q8IZF4 528 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 PSD4Q8NDX1 1056 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 COQ10AQ96MF6 247 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 MED16Q9Y2X0 877 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 PLEKHM1Q9Y4G2 1056 aa6.89□□□□□ -1.31
CALD1-213ENST00000462181 F5H697 171 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 DNAJB5O75953 348 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 GCP02774 474 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 THP07101 528 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 PIM1P11309 404 aaPredicted RBP6.88□□□□□ -1.31
CALD1-213ENST00000462181 CHRM3P20309 590 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 GATA3P23771 443 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 NPTX2P47972 431 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 CACNB3P54284 484 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 HECTD2Q5U5R9 776 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 TMPRSS9Q7Z410 1059 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 PPP1R32Q7Z5V6 425 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 COL23A1Q86Y22 540 aaPredicted RBP6.88□□□□□ -1.31
CALD1-213ENST00000462181 LDLRAD3Q86YD5 345 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 SSH3Q8TE77 659 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 FBXO41Q8TF61 875 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 P2RX7Q99572 595 aaKnown RBP6.88□□□□□ -1.31
CALD1-213ENST00000462181 MRIQ9BWK5 157 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 SMOC2Q9H3U7 446 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 SYBUQ9NX95 663 aa6.88□□□□□ -1.31
CALD1-213ENST00000462181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
CALD1-213ENST00000462181 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 GRID2IPA4D2P6 1211 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 A6NNZ2 444 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 MYO1CO00159 1063 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 TRIAP1O43715 76 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 GRPP07492 148 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 NPR1P16066 1061 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 ITGALP20701 1170 aa6.87□□□□□ -1.31
CALD1-213ENST00000462181 TGM1P22735 817 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms