RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 THEM5Q8N1Q8 247 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 TTC9BQ8N6N2 239 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 C1orf127Q8N9H9 656 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 SHKBP1Q8TBC3 707 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 SMARCD2Q92925 531 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 FOXQ1Q9C009 403 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 DLGAP2Q9P1A6 1054 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 ASB3Q9Y575 518 aa20.44■□□□□ 0.86
VARS-220ENST00000461874 MYH15Q9Y2K3 1946 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 USP34Q70CQ2 3546 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 KANSL1LA0AUZ9 987 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 POLR2DO15514 142 aaKnown RBP20.43■□□□□ 0.86
VARS-220ENST00000461874 POLR2BP30876 1174 aaKnown RBP20.43■□□□□ 0.86
VARS-220ENST00000461874 ME1P48163 572 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 TEAD2Q15562 447 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 EPM2AIP1Q7L775 607 aaPredicted RBP20.43■□□□□ 0.86
VARS-220ENST00000461874 DNAJB7Q7Z6W7 309 aaPredicted RBP20.43■□□□□ 0.86
VARS-220ENST00000461874 LRRTM3Q86VH5 581 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 GPD1LQ8N335 351 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 PJA1Q8NG27 643 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 CXorf38Q8TB03 319 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 NOC3LQ8WTT2 800 aaKnown RBP20.43■□□□□ 0.86
VARS-220ENST00000461874 MAGEF1Q9HAY2 307 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 PDE11AQ9HCR9 933 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 CFAP45Q9UL16 551 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 AGAP1Q9UPQ3 857 aa20.43■□□□□ 0.86
VARS-220ENST00000461874 MYO15AQ9UKN7 3530 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 EIF3DO15371 548 aaKnown RBP eCLIP20.42■□□□□ 0.86
VARS-220ENST00000461874 SOAT2O75908 522 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 ITGB3P05106 788 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 TUFMP49411 452 aaKnown RBP20.42■□□□□ 0.86
VARS-220ENST00000461874 SMARCB1Q12824 385 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 RESP18Q5W5W9 173 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 CSGALNACT2Q8N6G5 542 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 LRRC52Q8N7C0 313 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 ZSCAN18Q8TBC5 510 aaPredicted RBP20.42■□□□□ 0.86
VARS-220ENST00000461874 ZNF507Q8TCN5 953 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 PSMG2Q969U7 264 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 FAM84AQ96KN4 292 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 GPR88Q9GZN0 384 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 TRPV4Q9HBA0 871 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 FAM13BQ9NYF5 915 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 RCOR1Q9UKL0 485 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 ITGA11Q9UKX5 1188 aa20.42■□□□□ 0.86
VARS-220ENST00000461874 PTPRZ1P23471 2315 aaPredicted RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 RIF1Q5UIP0 2472 aaKnown RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 A0A1W2PRU2 124 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 GFRA3O60609 400 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 GLULP15104 373 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 VIPR2P41587 438 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 DNM1Q05193 864 aaKnown RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 EHHADHQ08426 723 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 GRM2Q14416 872 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 FAM26FQ5R3K3 315 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 SCARA3Q6AZY7 606 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 UNC13DQ70J99 1090 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 ITIH5Q86UX2 942 aa20.41■□□□□ 0.86
VARS-220ENST00000461874 C2orf15Q8WU43 125 aaKnown RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 SEPT5Q99719 369 aaPredicted RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 TRMT61BQ9BVS5 477 aaKnown RBP20.41■□□□□ 0.86
VARS-220ENST00000461874 ZNF233A6NK53 670 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 LRRN2O75325 713 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 PSMC3P17980 439 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 CDR1P51861 262 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 RBP5P82980 135 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 MGAT5BQ3V5L5 792 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 VITQ6UXI7 678 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 GAREM2Q75VX8 874 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 FRMD5Q7Z6J6 570 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 CBWD2Q8IUF1 395 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 DCP1BQ8IZD4 617 aaKnown RBP20.4■□□□□ 0.86
VARS-220ENST00000461874 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 SPPL2BQ8TCT7 592 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 DNASE1L2Q92874 299 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 OSBPL6Q9BZF3 934 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 MTMR12Q9C0I1 747 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 SLITRK6Q9H5Y7 841 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 BRD9Q9H8M2 597 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 ZNF334Q9HCZ1 680 aaPredicted RBP20.4■□□□□ 0.86
VARS-220ENST00000461874 INTS13Q9NVM9 706 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 HSPBP1Q9NZL4 362 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 SIX4Q9UIU6 781 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 L1RE1Q9UN81 338 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 MTF2Q9Y483 593 aaPredicted RBP20.4■□□□□ 0.86
VARS-220ENST00000461874 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
VARS-220ENST00000461874 F5P12259 2224 aa20.39■□□□□ 0.86
VARS-220ENST00000461874 DMDP11532 3685 aa20.39■□□□□ 0.86
VARS-220ENST00000461874 FAM170BA6NMN3 283 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 HUS1O60921 280 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 FGF19O95750 216 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 KRT19P08727 400 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 TMEM191BP0C7N4 346 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 HAPLN1P10915 354 aaPredicted RBP20.39■□□□□ 0.85
VARS-220ENST00000461874 ATF6P18850 670 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 CD72P21854 359 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 CASP1P29466 404 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 BFSP1Q12934 665 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 UBXN2BQ14CS0 331 aa20.39■□□□□ 0.85
VARS-220ENST00000461874 SURF1Q15526 300 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms