RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SPPL2BQ8TCT7 592 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 DEPDC1BQ8WUY9 529 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 SMARCD2Q92925 531 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 THG1LQ9NWX6 298 aaKnown RBP9.56□□□□□ -0.88
LDB1-203ENST00000461873 ABI2Q9NYB9 513 aaPredicted RBP9.56□□□□□ -0.88
LDB1-203ENST00000461873 HSFX1Q9UBD0 423 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 ITGA11Q9UKX5 1188 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 AGAP1Q9UPQ3 857 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 STYXL1Q9Y6J8 313 aa9.56□□□□□ -0.88
LDB1-203ENST00000461873 A0A1W2PRU2 124 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TISP43B9A030 160 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 PI15O43692 258 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 PRPF40AO75400 957 aaKnown RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 F13A1P00488 732 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 ITGB3P05106 788 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 ADRB2P07550 413 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 NPR3P17342 541 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TNNI1P19237 187 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TRIM21P19474 475 aaKnown RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 POLR2BP30876 1174 aaKnown RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 GDI1P31150 447 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 AARSP49588 968 aaKnown RBP eCLIP9.55□□□□□ -0.88
LDB1-203ENST00000461873 KPNA1P52294 538 aaPredicted RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 STARD6P59095 220 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 GRM2Q14416 872 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 SLC5A9Q2M3M2 681 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 CENPPQ6IPU0 288 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 SLC39A4Q6P5W5 647 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 C1orf228Q6PIY5 440 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TPRG1Q6ZUI0 275 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 BRSK2Q8IWQ3 736 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 TMEM86AQ8N2M4 240 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 ATAD1Q8NBU5 361 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 PJA1Q8NG27 643 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 DNASE1L2Q92874 299 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 EXOC4Q96A65 974 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 DNAJC19Q96DA6 116 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 RPP25Q9BUL9 199 aaKnown RBP9.55□□□□□ -0.88
LDB1-203ENST00000461873 SEMA4AQ9H3S1 761 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 ZMYM5Q9UJ78 669 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 PCDHB5Q9Y5E4 795 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 SNX9Q9Y5X1 595 aa9.55□□□□□ -0.88
LDB1-203ENST00000461873 MIA3Q5JRA6 1907 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 ANO9A1A5B4 782 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 MTMR11A4FU01 709 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
LDB1-203ENST00000461873 FAM189A1O60320 539 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 PHACTR2O75167 634 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 KIF20AO95235 890 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 CYP11A1P05108 521 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 GJA1P17302 382 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 GABRR2P28476 465 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 PCSK1P29120 753 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 AVPR1AP37288 418 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 LHX1P48742 406 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 SNRPFP62306 86 aaKnown RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 RPL10AP62906 217 aaKnown RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 AMPD2Q01433 879 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 TRPC3Q13507 836 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 TEAD2Q15562 447 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FAM78AQ5JUQ0 283 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FAM26FQ5R3K3 315 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 GPR158Q5T848 1215 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 TANGO2Q6ICL3 276 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 CC2D1AQ6P1N0 951 aaPredicted RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 DNAJB7Q7Z6W7 309 aaPredicted RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 C1orf210Q8IVY1 113 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 LRRC52Q8N7C0 313 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 RDH13Q8NBN7 331 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 GOLGA5Q8TBA6 731 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 LRRC15Q8TF66 581 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 PSMG2Q969U7 264 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 TCEAL4Q96EI5 215 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 ASB16Q96NS5 453 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FIZ1Q96SL8 496 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 OSBPL6Q9BZF3 934 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FOXQ1Q9C009 403 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 TRIM9Q9C026 710 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 ZCWPW1Q9H0M4 648 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 EHD2Q9NZN4 543 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 CEP72Q9P209 647 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 UXTQ9UBK9 157 aaPredicted RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 MAGED2Q9UNF1 606 aaPredicted RBP9.54□□□□□ -0.88
LDB1-203ENST00000461873 UBE4BO95155 1302 aa9.54□□□□□ -0.88
LDB1-203ENST00000461873 FRMD3A2A2Y4 597 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 PPEF2O14830 753 aa9.53□□□□□ -0.88
LDB1-203ENST00000461873 MEFVO15553 781 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms