RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 ADAT2Q7Z6V5 191 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ACOT1Q86TX2 421 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 IFT20Q8IY31 132 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ADGRF2Q8IZF7 708 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 THEM5Q8N1Q8 247 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 LINC01465Q8N7H1 131 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 C18orf25Q96B23 403 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TSEN34Q9BSV6 310 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TMEM106CQ9BVX2 250 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 OSGEPQ9NPF4 335 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 AVENQ9NQS1 362 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 RNF19AQ9NV58 838 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TAS2R14Q9NYV8 317 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TUBGCP4Q9UGJ1 667 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CHORDC1Q9UHD1 332 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 NOCTQ9UK39 431 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PCDHGC5Q9Y5F6 944 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ALG6Q9Y672 507 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PTPRFP10586 1907 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 LOXHD1Q8IVV2 1947 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 NCANO14594 1321 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 MCM3APO60318 1980 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 RLFQ13129 1914 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC188H7C350 402 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CYB561D2O14569 222 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CAPN9O14815 690 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF185O15231 689 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 TRAPPC3O43617 180 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ADAMTS4O75173 837 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 GPR32O75388 356 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ABL1P00519 1130 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CALCAP01258 141 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 IQCF3P0C7M6 154 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 KRT3P12035 628 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 PRLRP16471 622 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 COMTP21964 271 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC1A1P43005 524 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SCNN1GP51170 649 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF211Q13398 564 aaPredicted RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 BRD3Q15059 726 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SCYL2Q6P3W7 929 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 MCOLN2Q8IZK6 566 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 UBA3Q8TBC4 463 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 IFT81Q8WYA0 676 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FAXDC2Q96IV6 333 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 VCPIP1Q96JH7 1222 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC114Q96M63 670 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 KRT12Q99456 494 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 MAK16Q9BXY0 300 aaKnown RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SEZ6LQ9BYH1 1024 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SENP6Q9GZR1 1112 aaPredicted RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 TRPV6Q9H1D0 765 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ISCUQ9H1K1 167 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 TSPYL2Q9H2G4 693 aaPredicted RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 NGRNQ9NPE2 291 aaKnown RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SAGE1Q9NXZ1 904 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 GIT1Q9Y2X7 761 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 LRRD1A4D1F6 860 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CASTOR2A6NHX0 329 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 HOXA2O43364 376 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CAND2O75155 1236 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ZRANB2O95218 330 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 GAS8O95995 478 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 POMCP01189 267 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FGGP02679 453 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SETSIPP0DME0 302 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ODC1P11926 461 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CTGFP29279 349 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 GTF2F1P35269 517 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ACTN2P35609 894 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 RGS7P49802 495 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 WNT7BP56706 349 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM193AP78312 1265 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 C2CD6Q53TS8 623 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 C9orf57Q5W0N0 161 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 C11orf63Q6NUN7 778 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 GSTA5Q7RTV2 222 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 UNC93AQ86WB7 457 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 PALB2Q86YC2 1186 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 RHOT1Q8IXI2 618 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC105Q8IYK2 499 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 SPATA4Q8NEY3 305 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FEZF2Q8TBJ5 459 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 COG1Q8WTW3 980 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 LPPQ93052 612 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 MAGOHBQ96A72 148 aaKnown RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 RNPC3Q96LT9 517 aaKnown RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 ZFP42Q96MM3 310 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 MCEEQ96PE7 176 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 PCDHB18PQ96TA0 734 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 NCAPGQ9BPX3 1015 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 TLR10Q9BXR5 811 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FTHL17Q9BXU8 183 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 RAB17Q9H0T7 212 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 PRDM5Q9NQX1 630 aaPredicted RBP4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 PRKAG2Q9UGJ0 569 aa4.36□□□□□ -1.71
ATP13A3-206ENST00000461660 FEZ2Q9UHY8 353 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms