RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DNERQ8NFT8 737 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 OR52N2Q8NGI0 321 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 POF1BQ8WVV4 589 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TMEM41AQ96HV5 264 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 SNX22Q96L94 193 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 LRRC37BQ96QE4 947 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 OR14A2Q96R54 314 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 P2RX7Q99572 595 aaKnown RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF747Q9BV97 191 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 LSM14BQ9BX40 385 aaKnown RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TINAGL1Q9GZM7 467 aaPredicted RBP3.67□□□□□ -1.82
HDAC6-212ENST00000461608 ZCWPW1Q9H0M4 648 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 SLAMF7Q9NQ25 335 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TM7SF3Q9NS93 570 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 SACM1LQ9NTJ5 587 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 COL20A1Q9P218 1284 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 MYO1AQ9UBC5 1043 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 CPNE7Q9UBL6 633 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 CEP83Q9Y592 693 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 USP19O94966 1318 aa3.67□□□□□ -1.82
HDAC6-212ENST00000461608 TCRBV7S2A1N4TA0A589 114 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 CDHR4A6H8M9 788 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 NPEPPSL1A6NEC2 478 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 GOLGA6L6A8MZA4 724 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 PYCARD-AS1I3L0S3 204 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SKAP2O75563 359 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 UNC5CO95185 931 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPATA31D3P0C874 917 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 IDEP14735 1019 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 TYRP1P17643 537 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 HDCP19113 662 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 FGFR2P21802 821 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 GCSHP23434 173 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ZNF135P52742 658 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ATXN1P54253 815 aaKnown RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 RPS16P62249 146 aaKnown RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 BLMHQ13867 455 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 STARD3Q14849 445 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ARL13BQ3SXY8 428 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 INO80DQ53TQ3 878 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 UTP14CQ5TAP6 766 aaKnown RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ANO1Q5XXA6 986 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 PGBD2Q6P3X8 592 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPATA31D4Q6ZUB0 917 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 HTR3DQ70Z44 454 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 UBE3BQ7Z3V4 1068 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 CIR1Q86X95 450 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 MICU3Q86XE3 530 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 COL23A1Q86Y22 540 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 KRT73Q86Y46 540 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ATP11CQ8NB49 1132 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPATA5Q8NB90 893 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 VPS37AQ8NEZ2 397 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 OR10H5Q8NGA6 315 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SLC35B2Q8TB61 432 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 MAML1Q92585 1016 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPSB4Q96A44 273 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 FAM89AQ96GI7 184 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 MED15Q96RN5 788 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 PPP1R9BQ96SB3 815 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SMOQ99835 787 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 MYOCQ99972 504 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 CRB3Q9BUF7 120 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPATA5L1Q9BVQ7 753 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 STK33Q9BYT3 514 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 KLC2Q9H0B6 622 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 RNPEPQ9H4A4 650 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SMURF2Q9HAU4 748 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 SPON1Q9HCB6 807 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ZSCAN32Q9NX65 697 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 MAGED2Q9UNF1 606 aaPredicted RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 ZFR2Q9UPR6 939 aaKnown RBP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 TMX2Q9Y320 296 aa3.66□□□□□ -1.82
HDAC6-212ENST00000461608 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.66□□□□□ -1.82
HDAC6-212ENST00000461608 GOLGA6L3A6NEY3 463 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 E7ENX8 843 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 M0QYG6 137 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 AREL1O15033 823 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 STC2O76061 302 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 AGFG2O95081 481 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 MT-ND5P03915 603 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ITGB1P05556 798 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 SBK3P0C264 359 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ATXN1LP0C7T5 689 aaKnown RBP3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ABCB4P21439 1286 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 LMO1P25800 156 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 MSX2P35548 267 aaPredicted RBP3.65□□□□□ -1.83
HDAC6-212ENST00000461608 GRK6P43250 576 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 TRAPPC10P48553 1259 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 CCT5P48643 541 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 SLC11A2P49281 568 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 CARSP49589 748 aaKnown RBP3.65□□□□□ -1.83
HDAC6-212ENST00000461608 MAPK10P53779 464 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 PSMC1P62191 440 aaKnown RBP3.65□□□□□ -1.83
HDAC6-212ENST00000461608 TAP2Q03519 686 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ZNF844Q08AG5 666 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 PMS2P11Q13670 270 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ICAM4Q14773 271 aa3.65□□□□□ -1.83
HDAC6-212ENST00000461608 ACAP1Q15027 740 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms