RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 GSE1Q14687 1217 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 WDR72Q3MJ13 1102 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 CD300LGQ6UXG3 332 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
COL5A3-202ENST00000461214 TMEM86AQ8N2M4 240 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 TTC39CQ8N584 583 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 FBXO22Q8NEZ5 403 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 PI4K2AQ9BTU6 479 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 C11orf84Q9BUA3 381 aaPredicted RBP15.43■□□□□ 0.06
COL5A3-202ENST00000461214 BCO2Q9BYV7 579 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 SIX2Q9NPC8 291 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 LZTS1Q9Y250 596 aa15.43■□□□□ 0.06
COL5A3-202ENST00000461214 ZNF638Q14966 1978 aaKnown RBP15.43■□□□□ 0.06
COL5A3-202ENST00000461214 ZNF318Q5VUA4 2279 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 SPTLC1O15269 473 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 TADA2AO75478 443 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 CYP11A1P05108 521 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 FAM163BP0C2L3 166 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 SLC9A1P19634 815 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 TYMPP19971 482 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 PBX3P40426 434 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 ASPAP45381 313 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 FOXK2Q01167 660 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 KRT17Q04695 432 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 UBE3AQ05086 875 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 TIGD5Q53EQ6 642 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 FIGNQ5HY92 759 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 DDX53Q86TM3 631 aaKnown RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 TMEM173Q86WV6 379 aaPredicted RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 APPL2Q8NEU8 664 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 NEK11Q8NG66 645 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 HASPINQ8TF76 798 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 BCL7CQ8WUZ0 217 aaPredicted RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 RABGGTAQ92696 567 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 SENP8Q96LD8 212 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 C17orf80Q9BSJ5 609 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 HERC2P3Q9BVR0 1158 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 LSM14BQ9BX40 385 aaKnown RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 CYP3A43Q9HB55 503 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 APOBEC3GQ9HC16 384 aaKnown RBP15.42■□□□□ 0.06
COL5A3-202ENST00000461214 FAM50BQ9Y247 325 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 OBSL1O75147 1896 aa15.42■□□□□ 0.06
COL5A3-202ENST00000461214 F8W810 466 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 HUS1O60921 280 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 TACC1O75410 805 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 FGF18O76093 207 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 ZNF75DP51815 510 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 CUL2Q13617 745 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 TRIM14Q14142 442 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 SCARA3Q6AZY7 606 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 SPOPLQ6IQ16 392 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 PDXDC1Q6P996 788 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 ADHFE1Q8IWW8 467 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 GPR65Q8IYL9 337 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 PPM1KQ8N3J5 372 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
COL5A3-202ENST00000461214 NUP58Q9BVL2 599 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 GANQ9H2C0 597 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 CEP72Q9P209 647 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
COL5A3-202ENST00000461214 DENND4CQ5VZ89 1909 aa15.41■□□□□ 0.06
COL5A3-202ENST00000461214 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 NT5C1B-RDH14C9J2C7 533 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 CYB561D2O14569 222 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 AP5Z1O43299 807 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 LRRN2O75325 713 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 SOD2P04179 222 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 UCHL3P15374 230 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
COL5A3-202ENST00000461214 FGFR3P22607 806 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 CDC25BP30305 580 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 BRCC3P46736 316 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 MFAP3P55082 362 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 INCA1Q0VD86 236 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 CLUL1Q15846 466 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 KLHDC7AQ5VTJ3 777 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 PHLDB3Q6NSJ2 640 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 DPY19L2P1Q6NXN4 242 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.4■□□□□ 0.06
COL5A3-202ENST00000461214 VSTM4Q8IW00 320 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 ARHGEF19Q8IW93 802 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 ADGRF2Q8IZF7 708 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 OXCT2Q9BYC2 517 aaPredicted RBP15.4■□□□□ 0.06
COL5A3-202ENST00000461214 GPR62Q9BZJ7 368 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 EDEM3Q9BZQ6 932 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
COL5A3-202ENST00000461214 FAM207AQ9NSI2 230 aaPredicted RBP15.4■□□□□ 0.06
COL5A3-202ENST00000461214 PRKAG3Q9UGI9 489 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms