RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GBA2Q9HCG7 927 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 VTA1Q9NP79 307 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 DIAPH3Q9NSV4 1193 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 MCM9Q9NXL9 1143 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 TMOD2Q9NZR1 351 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 CBLCQ9ULV8 474 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 PCDHB4Q9Y5E5 795 aa5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 RPAP1Q9BWH6 1393 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-203ENST00000460928 DDX60LQ5H9U9 1706 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 TPD52L2O43399 206 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 AKAP8O43823 692 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CAND2O75155 1236 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 ENTPD3O75355 529 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 RFPL1O75677 317 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 DGKIO75912 1065 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 MYBL2P10244 700 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CCND1P24385 295 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 LACTBP83111 547 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 ABCB5Q2M3G0 1257 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CTR9Q6PD62 1173 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 FAM83AQ86UY5 434 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CBARPQ8N350 705 aaPredicted RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 TTC8Q8TAM2 541 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 FUBP3Q96I24 572 aaKnown RBP eCLIP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 SCYL1Q96KG9 808 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 JAM3Q9BX67 310 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CRNKL1Q9BZJ0 848 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 TMEM168Q9H0V1 697 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 L2HGDHQ9H9P8 463 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 RBM28Q9NW13 759 aaKnown RBP5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 OXSMQ9NWU1 459 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CLDND1Q9NY35 253 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 PPP4R1LQ9P1A2 415 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 TSC22D4Q9Y3Q8 395 aa5.51□□□□□ -1.53
ATPAF1-203ENST00000460928 CCDC171Q6TFL3 1326 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 FSD2A1L4K1 749 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 MAFKO60675 156 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 OFD1O75665 1012 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 ABLIM3O94929 683 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 FGAP02671 866 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 LRG1P02750 347 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 HSPD1P10809 573 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 AKR1B1P15121 316 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SHMT1P34896 483 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 PLA2G5P39877 138 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 TDO2P48775 406 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 EPHB4P54760 987 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 MLLT6P55198 1093 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SESN3P58005 492 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 ERVK-21P61565 698 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 VGLL4Q14135 290 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 MLC1Q15049 377 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 INAVAQ3KP66 663 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 MAP9Q49MG5 647 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 BMP2KLQ5H9B9 411 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 FKBP1CQ5VVH2 108 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 CCSAPQ6IQ19 270 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 ZSCAN25Q6NSZ9 544 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 RASGRP2Q7LDG7 609 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 OTOP1Q7RTM1 612 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 LIMS2Q7Z4I7 341 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 CREBRFQ8IUR6 639 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 TBC1D10CQ8IV04 446 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 TCEAL8Q8IYN2 117 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 EFHBQ8N7U6 833 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 CLRN3Q8NCR9 226 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 JPH3Q8WXH2 748 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 ZCCHC14Q8WYQ9 949 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SLC5A5Q92911 643 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 HELLSQ9NRZ9 838 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 ZHX1Q9UKY1 873 aaPredicted RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SPTBN5Q9NRC6 3674 aaKnown RBP5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 PAPPA2Q9BXP8 1791 aa5.5□□□□□ -1.53
ATPAF1-203ENST00000460928 SLC12A8A0AV02 714 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GOLGA6CA6NDK9 693 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GOLGA6BA6NDN3 693 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 TGM5O43548 720 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 NMT2O60551 498 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 KRT37O76014 449 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 ZFYP08048 801 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GOLGA6DP0CG33 693 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 KRT15P19012 456 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GUCY1A2P33402 732 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 MRE11P49959 708 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 JAM2P57087 298 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 KLF1Q13351 362 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 TNFAIP1Q13829 316 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 CDSNQ15517 529 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GPR19Q15760 415 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 SUPT20HL1Q3ZLR7 823 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms