RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 PLIN2Q99541 437 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 REEP2Q9BRK0 252 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 NOC4LQ9BVI4 516 aaKnown RBP6.22□□□□□ -1.41
PTPN12-209ENST00000460731 NIF3L1Q9GZT8 377 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 ATP6V0A4Q9HBG4 840 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 IFT122Q9HBG6 1241 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 OLFML3Q9NRN5 406 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 TRMT13Q9NUP7 481 aaKnown RBP6.22□□□□□ -1.41
PTPN12-209ENST00000460731 DACT1Q9NYF0 836 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 ARHGAP28Q9P2N2 729 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 SEL1LQ9UBV2 794 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 ARID2Q68CP9 1835 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 TET1Q8NFU7 2136 aa6.22□□□□□ -1.41
PTPN12-209ENST00000460731 TNRC18O15417 2968 aaPredicted RBP6.21□□□□□ -1.41
PTPN12-209ENST00000460731 ALPK3Q96L96 1907 aa6.21□□□□□ -1.41
PTPN12-209ENST00000460731 TRIM43BA6NCK2 446 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 NUAK1O60285 661 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 HIP1RO75146 1068 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 RHOBTB3O94955 611 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 MBD3O95983 291 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TIMP1P01033 207 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CXCL10P02778 98 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CYP2C9P11712 490 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CKBP12277 381 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 PLS3P13797 630 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GAP43P17677 238 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 PTMSP20962 102 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 EIF4BP23588 611 aaKnown RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 NAMPTP43490 491 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 DNM2P50570 870 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GPC3P51654 580 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CRYBB1P53674 252 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 POLGP54098 1239 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GTF2BQ00403 316 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 LAMTOR4Q0VGL1 99 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 BFSP2Q13515 415 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 FAM187BQ17R55 369 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 KLHL40Q2TBA0 621 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TRIM60Q495X7 471 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CDKAL1Q5VV42 579 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 FOXR2Q6PJQ5 311 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 UNC13DQ70J99 1090 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 EPM2AIP1Q7L775 607 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 ZNF720Q7Z2F6 126 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 SRGAP1Q7Z6B7 1085 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GPBP1Q86WP2 473 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 USP38Q8NB14 1042 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 SLC17A8Q8NDX2 589 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TMEM161BQ8NDZ6 487 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GRIN3AQ8TCU5 1115 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 PSPC1Q8WXF1 523 aaKnown RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TMEM143Q96AN5 459 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TRIM43Q96BQ3 446 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 ALKBH8Q96BT7 664 aaKnown RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 ZBTB10Q96DT7 871 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 SH2D3AQ9BRG2 576 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 TRAIPQ9BWF2 469 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CELF4Q9BZC1 486 aaKnown RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 GTPBP4Q9BZE4 634 aaKnown RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 FZD8Q9H461 694 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 CLSTN2Q9H4D0 955 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 SUCLA2Q9P2R7 463 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-209ENST00000460731 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
PTPN12-209ENST00000460731 NPHP3-ACAD11A0A0J9YXS1 232 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CCDC85CA6NKD9 419 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 RSPH10B2B2RC85 870 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 H3BS24 57 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 TLR3O15455 904 aaKnown RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 PIGRP01833 764 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 HPXP02790 462 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CLTBP09497 229 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 IQCF3P0C7M6 154 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 RSPH10BP0C881 870 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 DARSP14868 501 aaKnown RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 ITGB8P26012 769 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 HOXA11P31270 313 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 ABCD1P33897 745 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 NPTX2P47972 431 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CLCN3P51790 818 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 EFNA5P52803 228 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 NCKAP1LP55160 1127 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 SOX10P56693 466 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 MRPS6P82932 125 aaKnown RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 PSMD2Q13200 908 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CUL4BQ13620 913 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CAPSQ13938 189 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 POSTNQ15063 836 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 PPP2R5AQ15172 486 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 ZRSR1Q15695 479 aaKnown RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 BMT2Q1RMZ1 405 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 SKOR2Q2VWA4 1001 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-209ENST00000460731 FBXO47Q5MNV8 452 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 SFRP5Q5T4F7 317 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 ZNF618Q5T7W0 954 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 GLYCTKQ8IVS8 523 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 CEP57L1Q8IYX8 460 aa6.2□□□□□ -1.42
PTPN12-209ENST00000460731 LRRC71Q8N4P6 559 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms