RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NIFKQ9BYG3 293 aaKnown RBP19.2■□□□□ 0.66
HPS3-202ENST00000460120 ELP3Q9H9T3 547 aa19.2■□□□□ 0.66
HPS3-202ENST00000460120 SNCAIPQ9Y6H5 919 aa19.2■□□□□ 0.66
HPS3-202ENST00000460120 ADM5C9JUS6 153 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 POC1B-GALNT4F8VUJ3 575 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 MSCO60682 206 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 MMP8P22894 467 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 SCTRP47872 440 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 ARSEP51690 589 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 CLCN3P51790 818 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 GPS1Q13098 491 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 ZNF699Q32M78 642 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 TRIM72Q6ZMU5 477 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 BRSK2Q8IWQ3 736 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 EMC1Q8N766 993 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 SLCO2A1Q92959 643 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
HPS3-202ENST00000460120 SLC40A1Q9NP59 571 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 SSC5DA1L4H1 1573 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 ATXN2Q99700 1313 aaKnown RBP19.19■□□□□ 0.66
HPS3-202ENST00000460120 ASS1P00966 412 aaKnown RBP19.19■□□□□ 0.66
HPS3-202ENST00000460120 CHRM1P11229 460 aaPredicted RBP19.19■□□□□ 0.66
HPS3-202ENST00000460120 CCNG2Q16589 344 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 FAM160B1Q5W0V3 765 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 FBXO16Q8IX29 292 aaPredicted RBP19.19■□□□□ 0.66
HPS3-202ENST00000460120 DNERQ8NFT8 737 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 CENPTQ96BT3 561 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 SLITRK1Q96PX8 696 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 IP6K2Q9UHH9 426 aa19.19■□□□□ 0.66
HPS3-202ENST00000460120 SPAG7O75391 227 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 PIGRP01833 764 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 C1QBPQ07021 282 aaKnown RBP19.18■□□□□ 0.66
HPS3-202ENST00000460120 SYCP2LQ5T4T6 812 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 NUGGCQ68CJ6 796 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 DENND1BQ6P3S1 775 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 LBX2Q6XYB7 198 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 CCDC89Q8N998 374 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 CHST13Q8NET6 341 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 NLGN2Q8NFZ4 835 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 EXD1Q8NHP7 514 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.18■□□□□ 0.66
HPS3-202ENST00000460120 SEPT1Q8WYJ6 367 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 SPATC1LQ9H0A9 340 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 CD248Q9HCU0 757 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 PARP14Q460N5 1801 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 TMEM191CA6NGB0 347 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 TOM1L1O75674 476 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 ICAM3P32942 547 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 MAN1A1P33908 653 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 TARBP2Q15633 366 aaKnown RBP19.18■□□□□ 0.66
HPS3-202ENST00000460120 MAPK6Q16659 721 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 EEF1DP3Q658K8 133 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 ERICH1Q86X53 443 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 WDTC1Q8N5D0 677 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 ANKS4BQ8N8V4 417 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 HOMER3Q9NSC5 361 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 GPRC5DQ9NZD1 345 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 NAALADL1Q9UQQ1 740 aa19.18■□□□□ 0.66
HPS3-202ENST00000460120 SGK1O00141 431 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 LIASO43766 372 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
HPS3-202ENST00000460120 RFC5P40937 340 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 DUOXA2Q1HG44 320 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 CLMNQ96JQ2 1002 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 ACO2Q99798 780 aaKnown RBP19.17■□□□□ 0.66
HPS3-202ENST00000460120 NIF3L1Q9GZT8 377 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 ABCF3Q9NUQ8 709 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 PCSK1NQ9UHG2 260 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 CXCL8P10145 99 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
HPS3-202ENST00000460120 GAD2Q05329 585 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 GJC2Q5T442 439 aaPredicted RBP19.17■□□□□ 0.66
HPS3-202ENST00000460120 ANKMY2Q8IV38 441 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 CCT6BQ92526 530 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 TMEM109Q9BVC6 243 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 KIF9Q9HAQ2 790 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 AGTPBP1Q9UPW5 1226 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 NEU2Q9Y3R4 380 aa19.17■□□□□ 0.66
HPS3-202ENST00000460120 CCT8L1PA6NM43 557 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 IRF6O14896 467 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 CETN2P41208 172 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 MAGEA4P43358 317 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 MFSD5Q6N075 450 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 SPOCD1Q6ZMY3 1216 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 WDR49Q8IV35 697 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 JOSD2Q8TAC2 188 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 SERPINB12Q96P63 405 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 ROPN1BQ9BZX4 212 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 SYNCQ9H7C4 482 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 VPS37BQ9H9H4 285 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 ROPN1Q9HAT0 212 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 IGKV6D-21A0A0A0MT36 114 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 FAM189A1O60320 539 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 PECAM1P16284 738 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 RFC1P35251 1148 aaPredicted RBP19.16■□□□□ 0.66
HPS3-202ENST00000460120 NEDD9Q14511 834 aa19.16■□□□□ 0.66
HPS3-202ENST00000460120 WDR72Q3MJ13 1102 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms