RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NPR3P17342 541 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 CYP2J2P51589 502 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 ARPP19P56211 112 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 POU5F1Q01860 360 aaKnown RBP16.82■□□□□ 0.28
SDF4-204ENST00000459994 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
SDF4-204ENST00000459994 LIN9Q5TKA1 542 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 ELMSAN1Q6PJG2 1045 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 ANKS3Q6ZW76 656 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 FILIP1Q7Z7B0 1213 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 ALYREFQ86V81 257 aaKnown RBP16.82■□□□□ 0.28
SDF4-204ENST00000459994 SUSD3Q96L08 255 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 PCIF1Q9H4Z3 704 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
SDF4-204ENST00000459994 TIMM13Q9Y5L4 95 aaPredicted RBP16.82■□□□□ 0.28
SDF4-204ENST00000459994 SLC16A3O15427 465 aaKnown RBP16.81■□□□□ 0.28
SDF4-204ENST00000459994 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 PI15O43692 258 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 EXOC3O60645 756 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 ABLIM3O94929 683 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 GNA14O95837 355 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 ADRB2P07550 413 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 CFHP08603 1231 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 NFICP08651 508 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 HNRNPA1P09651 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDF4-204ENST00000459994 FSHRP23945 695 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 LRPAP1P30533 357 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 RPL9P32969 192 aaKnown RBP16.81■□□□□ 0.28
SDF4-204ENST00000459994 ACOT2P49753 483 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 WNT7BP56706 349 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 HTR4Q13639 388 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 SLC5A9Q2M3M2 681 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 JADE1Q6IE81 842 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 SLC8B1Q6J4K2 584 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 SLC44A3Q8N4M1 653 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 ING5Q8WYH8 240 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 FGF14Q92915 247 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 FAM86C1Q9NVL1 165 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 CPSF3Q9UKF6 684 aaKnown RBP16.81■□□□□ 0.28
SDF4-204ENST00000459994 NUB1Q9Y5A7 615 aa16.81■□□□□ 0.28
SDF4-204ENST00000459994 COL4A2P08572 1712 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 KRBA1A5PL33 1030 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 ANHXE9PGG2 379 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 SYN3O14994 580 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 VNN2O95498 520 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 HOXA9P31269 272 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 PSMC2P35998 433 aaKnown RBP16.8■□□□□ 0.28
SDF4-204ENST00000459994 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
SDF4-204ENST00000459994 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 PARM1Q6UWI2 310 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 CRELD2Q6UXH1 353 aaPredicted RBP16.8■□□□□ 0.28
SDF4-204ENST00000459994 LUZP1Q86V48 1076 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 IRF2BP1Q8IU81 584 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 FAM84AQ96KN4 292 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 HSD3B7Q9H2F3 369 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 RPF1Q9H9Y2 349 aaKnown RBP16.8■□□□□ 0.28
SDF4-204ENST00000459994 PLEKHA5Q9HAU0 1116 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
SDF4-204ENST00000459994 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 IGSF9Q9P2J2 1179 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 FRMD4BQ9Y2L6 1034 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 NUMBLQ9Y6R0 609 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
SDF4-204ENST00000459994 TICRRQ7Z2Z1 1910 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 GOLGA6L19H0YKK7 550 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 M0QZQ0 153 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 SPTLC1O15269 473 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 AKAP3O75969 853 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 ZNF18P17022 549 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 CASP4P49662 377 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
SDF4-204ENST00000459994 ENPEPQ07075 957 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 CTXN3Q4LDR2 81 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 FRMD5Q7Z6J6 570 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 SIX5Q8N196 739 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 ZNF461Q8TAF7 563 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 FGF13Q92913 245 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 FAM213AQ9BRX8 229 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 RBSNQ9H1K0 784 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
SDF4-204ENST00000459994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.28
SDF4-204ENST00000459994 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
SDF4-204ENST00000459994 PCDHB8Q9UN66 801 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 OBSL1O75147 1896 aa16.79■□□□□ 0.28
SDF4-204ENST00000459994 GOLGA8IPA6NC78 632 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 GOLGA8JA6NMD2 632 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
SDF4-204ENST00000459994 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
SDF4-204ENST00000459994 CDR1P51861 262 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 TPM4P67936 248 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms