RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 PTPN2P17706 415 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 CCNE1P24864 410 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 PCSK1P29120 753 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 TUFMP49411 452 aaKnown RBP17.34■□□□□ 0.37
CD28-203ENST00000458610 TNNC1P63316 161 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 MORC3Q14149 939 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 NFE2Q16621 373 aaPredicted RBP17.34■□□□□ 0.37
CD28-203ENST00000458610 SGSM1Q2NKQ1 1148 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ISM2Q6H9L7 571 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 IQCEQ6IPM2 695 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 RNF19BQ6ZMZ0 732 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ZDHHC14Q8IZN3 488 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 TAF4BQ92750 862 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ZNF512Q96ME7 567 aaPredicted RBP17.34■□□□□ 0.37
CD28-203ENST00000458610 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ACBD6Q9BR61 282 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ZCWPW1Q9H0M4 648 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 CD320Q9NPF0 282 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 KIAA1468Q9P260 1216 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 L1RE1Q9UN81 338 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
CD28-203ENST00000458610 ZFP37Q9Y6Q3 630 aaPredicted RBP17.34■□□□□ 0.37
CD28-203ENST00000458610 VWA8A3KMH1 1905 aa17.33■□□□□ 0.37
CD28-203ENST00000458610 ANK1P16157 1881 aa17.33■□□□□ 0.37
CD28-203ENST00000458610 CLSTN1O94985 981 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 C4BPAP04003 597 aaKnown RBP17.33■□□□□ 0.36
CD28-203ENST00000458610 P4HA1P13674 534 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 GTF2H1P32780 548 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 ALDH1A3P47895 512 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 CAMK4Q16566 473 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 WDR72Q3MJ13 1102 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 ANKRD40Q6AI12 368 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 FOXR2Q6PJQ5 311 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 RNF135Q8IUD6 432 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 ADGRF2Q8IZF7 708 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 LEMD2Q8NC56 503 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
CD28-203ENST00000458610 CDH22Q9UJ99 828 aa17.33■□□□□ 0.36
CD28-203ENST00000458610 ZNF197O14709 1029 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 SLC16A3O15427 465 aaKnown RBP17.32■□□□□ 0.36
CD28-203ENST00000458610 SEC24AO95486 1093 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 OR4Q2P0C623 313 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 FSHRP23945 695 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 GBP2P32456 591 aaPredicted RBP17.32■□□□□ 0.36
CD28-203ENST00000458610 EPHB3P54753 998 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 MYL6P60660 151 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 NCOA4Q13772 614 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 SOWAHAQ2M3V2 549 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 ZACNQ401N2 412 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 ZNF667Q5HYK9 610 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 GRASPQ7Z6J2 395 aaPredicted RBP17.32■□□□□ 0.36
CD28-203ENST00000458610 OR10T2Q8NGX3 314 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 SPPL2BQ8TCT7 592 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 PLEKHO2Q8TD55 490 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 FAM84AQ96KN4 292 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 IMPG2Q9BZV3 1241 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 GZF1Q9H116 711 aaPredicted RBP17.32■□□□□ 0.36
CD28-203ENST00000458610 SNX25Q9H3E2 840 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 VRTNQ9H8Y1 702 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
CD28-203ENST00000458610 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 PRUNE2Q8WUY3 3088 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 C2CD4DB7Z1M9 353 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 PI4K2BG5E9Z4 385 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 BIN1O00499 593 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 GABRDO14764 452 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 DCXO43602 365 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 TACC1O75410 805 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 WARSP23381 471 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 MCCD1P59942 119 aaPredicted RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 DLG4P78352 724 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 DUSP4Q13115 394 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 MAPRE1Q15691 268 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 ZNF699Q32M78 642 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 PABPC1LQ4VXU2 614 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 SLC39A12Q504Y0 691 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 CYP4A22Q5TCH4 519 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 LIMS2Q7Z4I7 341 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 CEP63Q96MT8 703 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 CLSTN2Q9H4D0 955 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 AVENQ9NQS1 362 aaPredicted RBP17.31■□□□□ 0.36
CD28-203ENST00000458610 CDH9Q9ULB4 789 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
CD28-203ENST00000458610 PPP1R3GB7ZBB8 358 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 TRIM21P19474 475 aaKnown RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 SP100P23497 879 aaPredicted RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 GNL1P36915 607 aaPredicted RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 TWF1Q12792 350 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 VEPH1Q14D04 833 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 KLHL10Q6JEL2 608 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 FILIP1Q7Z7B0 1213 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms