RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TTPALQ9BTX7 342 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 NLRC4Q9NPP4 1024 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 HMGXB4Q9UGU5 601 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 DNAJC12Q9UKB3 198 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PCDHB8Q9UN66 801 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 SIK3Q9Y2K2 1263 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 RWDD3Q9Y3V2 267 aa9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 SF3B1O75533 1304 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLTCL1-204ENST00000458188 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 FAM170AA1A519 330 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 C5orf67F2Z3F1 127 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 PER2O15055 1255 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 PMM2O15305 246 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ATP2C2O75185 946 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 NOL4O94818 638 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 EFEMP2O95967 443 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ODC1P11926 461 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 FGFR3P22607 806 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 IGFBP4P22692 258 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 PPM1AP35813 382 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 GNL1P36915 607 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 USP8P40818 1118 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 POLR2FP61218 127 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 CUL2Q13617 745 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 USP41Q3LFD5 358 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 CTXN3Q4LDR2 81 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 VARS2Q5ST30 1063 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 KLHDC7AQ5VTJ3 777 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 OVOS1Q6IE37 1185 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 METTL23Q86XA0 190 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 RNF168Q8IYW5 571 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ADGRF2Q8IZF7 708 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 LNX1Q8TBB1 728 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 TAF4BQ92750 862 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 SAMD11Q96NU1 681 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 TWNKQ96RR1 684 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 RTP3Q9BQQ7 232 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 C11orf84Q9BUA3 381 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 HERC2P3Q9BVR0 1158 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 NIF3L1Q9GZT8 377 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 DPEP3Q9H4B8 488 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ENTPD7Q9NQZ7 604 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 GDAP2Q9NXN4 497 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 PCDHB4Q9Y5E5 795 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 FHOD1Q9Y613 1164 aa9.29□□□□□ -0.92
CLTCL1-204ENST00000458188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 GTPBP10A4D1E9 387 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 A8MXQ7 604 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 LPXNO60711 386 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 CTSAP10619 480 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 SSTR3P32745 418 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 GLUD2P49448 558 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF75DP51815 510 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 NDST1P52848 882 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 PSMC1P62191 440 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 DSG1Q02413 1049 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 YWHAHQ04917 246 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ELAVL2Q12926 359 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 RAPGEF1Q13905 1077 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 PSMD5Q16401 504 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ADGRD2Q7Z7M1 963 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 PALB2Q86YC2 1186 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 TOP6BLQ8N6T0 577 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 NEK11Q8NG66 645 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 OR10T2Q8NGX3 314 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 WHAMMQ8TF30 809 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 PGLYRP2Q96PD5 576 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ERGIC2Q96RQ1 377 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 CLSTN3Q9BQT9 956 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ELOVL4Q9GZR5 314 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 ZBP1Q9H171 429 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 GANQ9H2C0 597 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 IGFLR1Q9H665 355 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 GRPEL1Q9HAV7 217 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 TLR9Q9NR96 1032 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 CISHQ9NSE2 258 aa9.28□□□□□ -0.92
CLTCL1-204ENST00000458188 APEX2Q9UBZ4 518 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms