RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RBP5P82980 135 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 CETN1Q12798 172 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 KYAT1Q16773 422 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 PTPROQ16827 1216 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 SGSM1Q2NKQ1 1148 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 CCDC122Q5T0U0 273 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 ALKBH5Q6P6C2 394 aaKnown RBP9.34□□□□□ -0.91
RIF1-208ENST00000457745 USP37Q86T82 979 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 SLC35F6Q8N357 371 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 HASPINQ8TF76 798 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 RTP3Q9BQQ7 232 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 TRIM7Q9C029 511 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 RSAD1Q9HA92 442 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 DNAJB4Q9UDY4 337 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 UBQLN1Q9UMX0 589 aaKnown RBP9.34□□□□□ -0.91
RIF1-208ENST00000457745 GUCA1BQ9UMX6 200 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 SQORQ9Y6N5 450 aa9.34□□□□□ -0.91
RIF1-208ENST00000457745 MACROD2A1Z1Q3 448 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 TULP2O00295 520 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 INPPL1O15357 1258 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NCK2O43639 380 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 BUB1O43683 1085 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 ATP2C2O75185 946 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 CLSTN1O94985 981 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 PFKMP08237 780 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 UNGP13051 313 aaPredicted RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 NDST1P52848 882 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 RABGGTBP53611 331 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 EPHB4P54760 987 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 CDR2Q01850 454 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 INCA1Q0VD86 236 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 PTP4A2Q12974 167 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 CLEC16AQ2KHT3 1053 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 C1orf53Q5VUE5 145 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 CD302Q8IX05 232 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 BEST2Q8NFU1 509 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 CYFIP2Q96F07 1278 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 TOX2Q96NM4 488 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 THAP2Q9H0W7 228 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 DEF6Q9H4E7 631 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 OSGEPQ9NPF4 335 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 GIT1Q9Y2X7 761 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 DAAM1Q9Y4D1 1078 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 TIMM13Q9Y5L4 95 aaPredicted RBP9.33□□□□□ -0.92
RIF1-208ENST00000457745 SNX9Q9Y5X1 595 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NLRC5Q86WI3 1866 aa9.33□□□□□ -0.92
RIF1-208ENST00000457745 NCANO14594 1321 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 GRID2IPA4D2P6 1211 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 PODXLO00592 558 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 THAP12O43422 761 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 KIF4AO95239 1232 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 CLTBP09497 229 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ACRP10323 421 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ZSCAN20P17040 1043 aaPredicted RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 ABCB4P21439 1286 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TNFAIP3P21580 790 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TBXAS1P24557 533 aaPredicted RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 ACAT1P24752 427 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 GNA15P30679 374 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ATICP31939 592 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 PBX3P40426 434 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 LILRA4P59901 499 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ETF1P62495 437 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 NOMO3P69849 1222 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 DEFB103AP81534 67 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 DSC1Q08554 894 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 BFSP2Q13515 415 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 BMS1Q14692 1282 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 PTPN14Q15678 1187 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 TIGD5Q53EQ6 642 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ZNF569Q5MCW4 686 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ZNF662Q6ZS27 426 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 C16orf59Q7L2K0 433 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 ENOSF1Q7L5Y1 443 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 KIAA1328Q86T90 577 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 NT5DC4Q86YG4 428 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 PDCL2Q8N4E4 241 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 LRRC52Q8N7C0 313 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 USP38Q8NB14 1042 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
RIF1-208ENST00000457745 ZNF606Q8WXB4 792 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 CPA5Q8WXQ8 436 aa9.32□□□□□ -0.92
RIF1-208ENST00000457745 TAF4BQ92750 862 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms