RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 STOML1Q9UBI4 398 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PIAS3Q9Y6X2 628 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SETXQ7Z333 2677 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MYH15Q9Y2K3 1946 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CCDC194A0A1B0GVG4 234 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 WDR64B1ANS9 1081 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 J3QKU1 62 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ZNF213O14771 459 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ARHGAP6O43182 974 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 EIF4EBP3O60516 100 aaPredicted RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CAVIN2O95810 425 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SPINK2P20155 84 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 AXLP30530 894 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CA8P35219 290 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SREBF1P36956 1147 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 GNAQP50148 359 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CLCN3P51790 818 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 NTHL1P78549 312 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 RNASELQ05823 741 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 POU5F1BQ06416 359 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ELF2Q15723 593 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 DUOXA2Q1HG44 320 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PABPC1LQ4VXU2 614 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 IFIT1BQ5T764 474 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PMS2CLQ68D20 193 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 EFCAB12Q6NXP0 572 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 USP17L6PQ6QN14 398 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 VITQ6UXI7 678 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SRGAP1Q7Z6B7 1085 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 TRIM42Q8IWZ5 723 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 LNX1Q8TBB1 728 aaPredicted RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 UBASH3BQ8TF42 649 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SMARCD2Q92925 531 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 FAM193BQ96PV7 902 aaPredicted RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CLSTN3Q9BQT9 956 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 DSCC1Q9BVC3 393 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 APOL6Q9BWW8 343 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 BCL11AQ9H165 835 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 GLT8D2Q9H1C3 349 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PRORYQ9H606 182 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 CCDC86Q9H6F5 360 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 BRD9Q9H8M2 597 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 TBC1D22BQ9NU19 505 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PCDHA6Q9UN73 950 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 GINS2Q9Y248 185 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 GIT1Q9Y2X7 761 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MRPS23Q9Y3D9 190 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PCDHB2Q9Y5E7 798 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PCDHA8Q9Y5H6 950 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 DNAH14Q0VDD8 3507 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 IGLV3-22A0A075B6J6 115 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MEIS3P2A8K0S8 358 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ADARB2-AS1A8MUL3 147 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ZNF263O14978 683 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 SMARCA5O60264 1052 aaPredicted RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 DDAH1O94760 285 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 STBD1O95210 358 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MED26O95402 600 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 RHOP08100 348 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ARSDP51689 593 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 AP3B2Q13367 1082 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 RTN1Q16799 776 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 FAM78AQ5JUQ0 283 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 LARP1BQ659C4 914 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 TWF2Q6IBS0 349 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ZNF843Q8N446 348 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 TTC16Q8NEE8 873 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 STK32AQ8WU08 396 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 LPPQ93052 612 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 JPH2Q9BR39 696 aaPredicted RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 UBAC1Q9BSL1 405 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 GPR62Q9BZJ7 368 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PSTPIP2Q9H939 334 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 NRBP2Q9NSY0 501 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 KCNK4Q9NYG8 393 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 BCCIPQ9P287 314 aaKnown RBP eCLIP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MTRRQ9UBK8 725 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 ADAM28Q9UKQ2 775 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 NDRG2Q9UN36 371 aaKnown RBP2.37□□□□□ -2.03
NEDD1-204ENST00000457368 RNF114Q9Y508 228 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 PCDHA10Q9Y5I2 948 aa2.37□□□□□ -2.03
NEDD1-204ENST00000457368 MYO15AQ9UKN7 3530 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 WDR81Q562E7 1941 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 A0A0D9SFI3 127 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 B4E1Z4 1266 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 SPECC1L-ADORA2AF8WAN1 911 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 hCG_1984214I3L0E3 225 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 TRDMT1O14717 391 aaKnown RBP2.36□□□□□ -2.03
NEDD1-204ENST00000457368 MEFVO15553 781 aaPredicted RBP2.36□□□□□ -2.03
NEDD1-204ENST00000457368 MOSPD3O75425 235 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 ABLIM3O94929 683 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 RPLP1P05386 114 aaKnown RBP2.36□□□□□ -2.03
NEDD1-204ENST00000457368 PTPN2P17706 415 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 RPL17P18621 184 aaKnown RBP2.36□□□□□ -2.03
NEDD1-204ENST00000457368 CCNE1P24864 410 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 HOXA11P31270 313 aaPredicted RBP2.36□□□□□ -2.03
NEDD1-204ENST00000457368 CIITAP33076 1130 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 GRIK3Q13003 919 aa2.36□□□□□ -2.03
NEDD1-204ENST00000457368 SLC14A1Q13336 389 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms