RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PTPRJQ12913 1337 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 FAM237AA0A1B0GTK4 181 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 VNN2O95498 520 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 RPN1P04843 607 aaKnown RBP17.46■□□□□ 0.39
CPSF6-203ENST00000456847 PRR29P0C7W0 189 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 SRFP11831 508 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 MYL4P12829 197 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 TNNI1P19237 187 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 EPHB3P54753 998 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 STK4Q13043 487 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 DUOXA2Q1HG44 320 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 PARM1Q6UWI2 310 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 HS6ST3Q8IZP7 471 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 ATAD1Q8NBU5 361 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 KIAA0895Q8NCT3 520 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 OR5B17Q8NGF7 314 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 FGF14Q92915 247 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 FAM122AQ96E09 287 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 BORCS6Q96GS4 357 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 ZCWPW1Q9H0M4 648 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 AVENQ9NQS1 362 aaPredicted RBP17.46■□□□□ 0.39
CPSF6-203ENST00000456847 CEP72Q9P209 647 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 SLC27A5Q9Y2P5 690 aa17.46■□□□□ 0.39
CPSF6-203ENST00000456847 GOLGA6L4A6NEF3 574 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 EXOC3O60645 756 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 RFX1P22670 979 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
CPSF6-203ENST00000456847 TSPY1Q01534 308 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CYP24A1Q07973 514 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 MYO1EQ12965 1108 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CENPPQ6IPU0 288 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 KRBA2Q6ZNG9 492 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CCDC127Q96BQ5 260 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CGRRF1Q99675 332 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 SEPT5Q99719 369 aaPredicted RBP17.45■□□□□ 0.38
CPSF6-203ENST00000456847 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 SIX4Q9UIU6 781 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 ARIH1Q9Y4X5 557 aaPredicted RBP17.45■□□□□ 0.38
CPSF6-203ENST00000456847 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 ZNF318Q5VUA4 2279 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CDR1P51861 262 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 PSMD6Q15008 389 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 MGAT5BQ3V5L5 792 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 PRSS36Q5K4E3 855 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 C12orf56Q8IXR9 622 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 DCP1BQ8IZD4 617 aaKnown RBP17.45■□□□□ 0.38
CPSF6-203ENST00000456847 SIX5Q8N196 739 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 TTC9BQ8N6N2 239 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 LEMD2Q8NC56 503 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 FLCNQ8NFG4 579 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 TCEAL4Q96EI5 215 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 KXD1Q9BQD3 176 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 CA14Q9ULX7 337 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 L1RE1Q9UN81 338 aa17.45■□□□□ 0.38
CPSF6-203ENST00000456847 PRPF40AO75400 957 aaKnown RBP17.44■□□□□ 0.38
CPSF6-203ENST00000456847 SOAT2O75908 522 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 MYL7Q01449 175 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 TMEM86AQ8N2M4 240 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 HPDLQ96IR7 371 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 KCNH6Q9H252 994 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 ABI2Q9NYB9 513 aaPredicted RBP17.44■□□□□ 0.38
CPSF6-203ENST00000456847 GDE1Q9NZC3 331 aa17.44■□□□□ 0.38
CPSF6-203ENST00000456847 CLSTN1O94985 981 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 ZNF202O95125 648 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 AVPR2P30518 371 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 PLA2G5P39877 138 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 VEPH1Q14D04 833 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 SCARA3Q6AZY7 606 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 ADGRF2Q8IZF7 708 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 CXorf38Q8TB03 319 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 C2orf15Q8WU43 125 aaKnown RBP17.43■□□□□ 0.38
CPSF6-203ENST00000456847 RPP25Q9BUL9 199 aaKnown RBP17.43■□□□□ 0.38
CPSF6-203ENST00000456847 GDAP2Q9NXN4 497 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 DDX43Q9NXZ2 648 aaKnown RBP17.43■□□□□ 0.38
CPSF6-203ENST00000456847 STK25O00506 426 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 KIF20AO95235 890 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 CCR2P41597 374 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 TUFMP49411 452 aaKnown RBP17.43■□□□□ 0.38
CPSF6-203ENST00000456847 SMARCB1Q12824 385 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 TRAPPC11Q7Z392 1133 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 SPPL2BQ8TCT7 592 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 GPR152Q8TDT2 470 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 SLITRK6Q9H5Y7 841 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 HSFX1Q9UBD0 423 aa17.43■□□□□ 0.38
CPSF6-203ENST00000456847 GJA1P17302 382 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 ACAT1P24752 427 aaKnown RBP17.42■□□□□ 0.38
CPSF6-203ENST00000456847 DPYDQ12882 1025 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 ITIH5Q86UX2 942 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 DNAJC25Q9H1X3 360 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 WNT16Q9UBV4 365 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 ASB3Q9Y575 518 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 PCDHB5Q9Y5E4 795 aa17.42■□□□□ 0.38
CPSF6-203ENST00000456847 CALUO43852 315 aaPredicted RBP17.41■□□□□ 0.38
CPSF6-203ENST00000456847 MICAL2O94851 1124 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 EPHA5P54756 1037 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms