RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 HSFX1Q9UBD0 423 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 HPSEQ9Y251 543 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 SLC27A5Q9Y2P5 690 aa22.87■■□□□ 1.25
HMGB3-205ENST00000455596 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
HMGB3-205ENST00000455596 ZDBF2Q9HCK1 2354 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 DENND4CQ5VZ89 1909 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 PTPN5P54829 565 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 RBP5P82980 135 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 NHLH1Q02575 133 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 BFSP1Q12934 665 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 SLC39A12Q504Y0 691 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 CWF19L1Q69YN2 538 aaKnown RBP22.86■■□□□ 1.25
HMGB3-205ENST00000455596 TMEM105Q8N8V8 129 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 ATAD1Q8NBU5 361 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 CXorf38Q8TB03 319 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 TCEAL4Q96EI5 215 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 RTP3Q9BQQ7 232 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 EXOC1Q9NV70 894 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 INTS13Q9NVM9 706 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 CGNQ9P2M7 1197 aaKnown RBP22.86■■□□□ 1.25
HMGB3-205ENST00000455596 CA14Q9ULX7 337 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 MIA3Q5JRA6 1907 aa22.86■■□□□ 1.25
HMGB3-205ENST00000455596 NUP210Q8TEM1 1887 aaPredicted RBP22.85■■□□□ 1.25
HMGB3-205ENST00000455596 KRBA1A5PL33 1030 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 CLIC2O15247 247 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 KLRC4O43908 158 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 TNNC2P02585 160 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 MYL4P12829 197 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 NPR3P17342 541 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 CCR2P41597 374 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 SYKP43405 635 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 CYP2J2P51589 502 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 EPHA5P54756 1037 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 SNRNP35Q16560 246 aaKnown RBP22.85■■□□□ 1.25
HMGB3-205ENST00000455596 KNOP1Q1ED39 458 aaKnown RBP22.85■■□□□ 1.25
HMGB3-205ENST00000455596 LMBRD2Q68DH5 695 aaPredicted RBP22.85■■□□□ 1.25
HMGB3-205ENST00000455596 XXYLT1Q8NBI6 393 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 RDH13Q8NBN7 331 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 C2orf15Q8WU43 125 aaKnown RBP22.85■■□□□ 1.25
HMGB3-205ENST00000455596 FAM84AQ96KN4 292 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 KXD1Q9BQD3 176 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 SIX4Q9UIU6 781 aa22.85■■□□□ 1.25
HMGB3-205ENST00000455596 HUS1O60921 280 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 ECI2O75521 394 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 MYL1P05976 194 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 RFX1P22670 979 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 TUFMP49411 452 aaKnown RBP22.84■■□□□ 1.25
HMGB3-205ENST00000455596 GPC5P78333 572 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 SMARCB1Q12824 385 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 PSMD2Q13200 908 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 DUOXA2Q1HG44 320 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 WDR49Q8IV35 697 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 DCP1BQ8IZD4 617 aaKnown RBP22.84■■□□□ 1.25
HMGB3-205ENST00000455596 TTC9BQ8N6N2 239 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 DNAJC25Q9H1X3 360 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 GDAP2Q9NXN4 497 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 ASB3Q9Y575 518 aa22.84■■□□□ 1.25
HMGB3-205ENST00000455596 PTPRJQ12913 1337 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 MUC6Q6W4X9 2439 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 FAM237AA0A1B0GTK4 181 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 STK25O00506 426 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 AOC1P19801 751 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 NDUFA8P51970 172 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 TCF15Q12870 199 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 MYO1EQ12965 1108 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 KMT5BQ4FZB7 885 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 SCARA3Q6AZY7 606 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 POTEHQ6S545 545 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 C12orf56Q8IXR9 622 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 TMEM86AQ8N2M4 240 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 PDCL2Q8N4E4 241 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 OR5B17Q8NGF7 314 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 SPPL2BQ8TCT7 592 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 ELSPBP1Q96BH3 223 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 SEPT5Q99719 369 aaPredicted RBP22.83■■□□□ 1.25
HMGB3-205ENST00000455596 ARHGEF3Q9NR81 526 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 L1RE1Q9UN81 338 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 SNX9Q9Y5X1 595 aa22.83■■□□□ 1.25
HMGB3-205ENST00000455596 OBSL1O75147 1896 aa22.83■■□□□ 1.24
HMGB3-205ENST00000455596 A0A1W2PQ27 194 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 A0A1W2PQ64 194 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 A0A1W2PQD8 194 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 GALR2O43603 387 aaPredicted RBP22.82■■□□□ 1.24
HMGB3-205ENST00000455596 PRPF40AO75400 957 aaKnown RBP22.82■■□□□ 1.24
HMGB3-205ENST00000455596 MOSPD3O75425 235 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 SOAT2O75908 522 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 TSPY1Q01534 308 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 STK4Q13043 487 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 PSMD6Q15008 389 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 MGAT5BQ3V5L5 792 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 ITIH5Q86UX2 942 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 LRRTM3Q86VH5 581 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 SPATA18Q8TC71 538 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 PSMG2Q969U7 264 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 FNBP1Q96RU3 617 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 LRRC3Q9BY71 257 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 ZFP14Q9HCL3 533 aa22.82■■□□□ 1.24
HMGB3-205ENST00000455596 DDX43Q9NXZ2 648 aaKnown RBP22.82■■□□□ 1.24
HMGB3-205ENST00000455596 ZNF638Q14966 1978 aaKnown RBP22.81■■□□□ 1.24
HMGB3-205ENST00000455596 TICRRQ7Z2Z1 1910 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms