RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 NELFCDQ8IXH7 590 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 GRAMD1CQ8IYS0 662 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 CSGALNACT2Q8N6G5 542 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 CACTINQ8WUQ7 758 aaKnown RBP17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZNF560Q96MR9 790 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 LRRC3Q9BY71 257 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 FOXQ1Q9C009 403 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 MTMR12Q9C0I1 747 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZCWPW1Q9H0M4 648 aa17.74■□□□□ 0.43
NCKIPSD-208ENST00000454134 PTPRJQ12913 1337 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 EIF3DO15371 548 aaKnown RBP eCLIP17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 MICAL2O94851 1124 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 DCNP07585 359 aaKnown RBP17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 KRT19P08727 400 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 BFSP1Q12934 665 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 PLD1Q13393 1074 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 CUL4BQ13620 913 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 GRM2Q14416 872 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 PHLDB3Q6NSJ2 640 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 UNC13DQ70J99 1090 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 LRRTM3Q86VH5 581 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 TMC8Q8IU68 726 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 CCDC105Q8IYK2 499 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 THEM5Q8N1Q8 247 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 DTWD2Q8NBA8 298 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 CXorf38Q8TB03 319 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 SHKBP1Q8TBC3 707 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZNF507Q8TCN5 953 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 ELSPBP1Q96BH3 223 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 ASB16Q96NS5 453 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 SEPT5Q99719 369 aaPredicted RBP17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 IRF2BPLQ9H1B7 796 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 MAGEF1Q9HAY2 307 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 HSPBP1Q9NZL4 362 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 SERTAD1Q9UHV2 236 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZDHHC9Q9Y397 364 aa17.73■□□□□ 0.43
NCKIPSD-208ENST00000454134 A0A1W2PRU2 124 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZNF233A6NK53 670 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 TGFB1I1O43294 461 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 TMEM191BP0C7N4 346 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 PNPLA4P41247 253 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 EHHADHQ08426 723 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 MLF2Q15773 248 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 MGAT5BQ3V5L5 792 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 SLC44A4Q53GD3 710 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 DNAJB7Q7Z6W7 309 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 LEMD2Q8NC56 503 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 OR5B17Q8NGF7 314 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 SCFD1Q8WVM8 642 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZFP14Q9HCL3 533 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZNF334Q9HCZ1 680 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 SLC39A2Q9NP94 309 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 AGPAT3Q9NRZ7 376 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 ITGA11Q9UKX5 1188 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 SIT1Q9Y3P8 196 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 PIEZO1Q92508 2521 aa17.72■□□□□ 0.43
NCKIPSD-208ENST00000454134 CACNA1HO95180 2353 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 KIAA0391O15091 583 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 CLIC2O15247 247 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 LRRN2O75325 713 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 VIPR2P41587 438 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 CYP2J2P51589 502 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 STARD6P59095 220 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 PFKPQ01813 784 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 STXBP5Q5T5C0 1151 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 CEP57L1Q8IYX8 460 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 LRRC52Q8N7C0 313 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 RDH13Q8NBN7 331 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 ZSCAN18Q8TBC5 510 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 FAM200AQ8TCP9 573 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 SMARCD2Q92925 531 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 SHDQ96IW2 340 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 LPIN3Q9BQK8 851 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 SLITRK6Q9H5Y7 841 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 TMLHEQ9NVH6 421 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 INTS13Q9NVM9 706 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 L1RE1Q9UN81 338 aa17.71■□□□□ 0.43
NCKIPSD-208ENST00000454134 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ACTN4O43707 911 aaKnown RBP17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ATF6P18850 670 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 CD72P21854 359 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ACAT1P24752 427 aaKnown RBP17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 RBP5P82980 135 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ANGPT1Q15389 498 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 VITQ6UXI7 678 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 GIPC2Q8TF65 315 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 LEO1Q8WVC0 666 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 PSMG2Q969U7 264 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ANKRD36BP1Q96IX9 119 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 ASB3Q9Y575 518 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 SNX9Q9Y5X1 595 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 NCANO14594 1321 aa17.7■□□□□ 0.42
NCKIPSD-208ENST00000454134 PVALEFA0A1B0GWK0 134 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms