RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 FAM13BQ9NYF5 915 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 ASB3Q9Y575 518 aa13.91□□□□□ -0.18
CHD3-206ENST00000452447 KANSL1LA0AUZ9 987 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.18
CHD3-206ENST00000452447 ITGB3P05106 788 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 GJA1P17302 382 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 POLR2BP30876 1174 aaKnown RBP13.9□□□□□ -0.18
CHD3-206ENST00000452447 SMARCB1Q12824 385 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 WSCD1Q658N2 575 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 POTEHQ6S545 545 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 GPD1LQ8N335 351 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 FAM200AQ8TCP9 573 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 SMARCD2Q92925 531 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 FOXQ1Q9C009 403 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 MAGEF1Q9HAY2 307 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
CHD3-206ENST00000452447 R3HCC1Q9Y3T6 440 aaKnown RBP13.9□□□□□ -0.18
CHD3-206ENST00000452447 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
CHD3-206ENST00000452447 A0A1W2PRU2 124 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 KRT19P08727 400 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 NBL1P41271 181 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 WNT7BP56706 349 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 UBXN2BQ14CS0 331 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 VEPH1Q14D04 833 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 TEAD2Q15562 447 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 MGAT5BQ3V5L5 792 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 DNAJB7Q7Z6W7 309 aaPredicted RBP13.89□□□□□ -0.19
CHD3-206ENST00000452447 CSGALNACT2Q8N6G5 542 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 ZSCAN18Q8TBC5 510 aaPredicted RBP13.89□□□□□ -0.19
CHD3-206ENST00000452447 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 ZSWIM3Q96MP5 696 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 SEPT5Q99719 369 aaPredicted RBP13.89□□□□□ -0.19
CHD3-206ENST00000452447 TRMT61BQ9BVS5 477 aaKnown RBP13.89□□□□□ -0.19
CHD3-206ENST00000452447 ZCWPW1Q9H0M4 648 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 DNAJC25Q9H1X3 360 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 ITGA11Q9UKX5 1188 aa13.89□□□□□ -0.19
CHD3-206ENST00000452447 ZNF233A6NK53 670 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 PROB1E7EW31 1015 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 NRG2O14511 850 aaPredicted RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 EIF3DO15371 548 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD3-206ENST00000452447 HUS1O60921 280 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 MOSPD3O75425 235 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 SOAT2O75908 522 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 FGF19O95750 216 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 PSMC3P17980 439 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 FCARP24071 287 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 CDR1P51861 262 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 TSPY1Q01534 308 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 GRM2Q14416 872 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 SURF1Q15526 300 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 TAF12Q16514 161 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 FAM26FQ5R3K3 315 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 DCP1BQ8IZD4 617 aaKnown RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 LRRC52Q8N7C0 313 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 GLIS3Q8NEA6 775 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 DNASE1L2Q92874 299 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 IRF7Q92985 503 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 PSMG2Q969U7 264 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 E2F7Q96AV8 911 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 BORCS6Q96GS4 357 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 ANKRD36BP1Q96IX9 119 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 DDX23Q9BUQ8 820 aaKnown RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 BCO2Q9BYV7 579 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 PCDHA7Q9UN72 937 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 ZNF638Q14966 1978 aaKnown RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 FAM170BA6NMN3 283 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 CD72P21854 359 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 VIPR2P41587 438 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 RBP5P82980 135 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 BFSP1Q12934 665 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 PKP1Q13835 747 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 CNNM4Q6P4Q7 775 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 TPRG1Q6ZUI0 275 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 UNC13DQ70J99 1090 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 TMC8Q8IU68 726 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 C1orf210Q8IVY1 113 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 SPPL2BQ8TCT7 592 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 DEPDC1BQ8WUY9 529 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 NELL2Q99435 816 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 LRRC3Q9BY71 257 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 MTMR12Q9C0I1 747 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
CHD3-206ENST00000452447 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
CHD3-206ENST00000452447 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms