RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ABLIM1O14639 778 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 TOM1L1O75674 476 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 FAM153BP0C7A2 387 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 UNGP13051 313 aaPredicted RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 KCNA4P22459 653 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 POU5F1Q01860 360 aaKnown RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 MXD4Q14582 209 aaPredicted RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 TRADDQ15628 312 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 TCTN1Q2MV58 587 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 ZNF771Q7L3S4 317 aaPredicted RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 NME8Q8N427 588 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 MREGQ8N565 214 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 ZNF564Q8TBZ8 553 aaPredicted RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 KRT35Q92764 455 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 EXOC4Q96A65 974 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 ACO2Q99798 780 aaKnown RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 ZSWIM1Q9BR11 485 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 UVRAGQ9P2Y5 699 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 FAM153AQ9UHL3 310 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 GINS2Q9Y248 185 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 PCDHB2Q9Y5E7 798 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 MICAL3Q7RTP6 2002 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 TMEM110-MUSTN1A8MSY1 372 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 CLDN3O15551 220 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 RNF40O75150 1001 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 CXCL10P02778 98 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 PRKCBP05771 671 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 COMTP21964 271 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 TMOD1P28289 359 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 ECHS1P30084 290 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 RFC2P35250 354 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 MARCKSL1P49006 195 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 PEX5P50542 639 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 CUL2Q13617 745 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 MESDQ14696 234 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 KIZQ2M2Z5 673 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 SEZ6Q53EL9 994 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 OTOP2Q7RTS6 562 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 IFT81Q8WYA0 676 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.42□□□□□ -0.582e-7■■■■■ 64.2
PKP4-206ENST00000452162 CELF4Q9BZC1 486 aaKnown RBP11.42□□□□□ -0.58
PKP4-206ENST00000452162 C2orf40Q9H1Z8 148 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 PSD3Q9NYI0 1048 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 CNTN6Q9UQ52 1028 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 TRPV2Q9Y5S1 764 aa11.42□□□□□ -0.58
PKP4-206ENST00000452162 GPR32O75388 356 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CLTAP09496 248 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 SRGAP2CP0DJJ0 459 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 GHRP10912 638 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 HARSP12081 509 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 TNFSF9P41273 254 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 BPIFB4P59827 614 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 PTENP60484 403 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 ZNF211Q13398 564 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 LPIN1Q14693 890 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CLUL1Q15846 466 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 ZBTB8OSQ8IWT0 167 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 TDHQ8IZJ6 230 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 UBL4BQ8N7F7 174 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 RNF149Q8NC42 400 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 WHAMMQ8TF30 809 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 TMEM40Q8WWA1 233 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 RIN2Q8WYP3 895 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 NAP1L3Q99457 506 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 M0QZ92 97 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 PHACTR2O75167 634 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 PARNO95453 639 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 FGBP02675 491 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 RPLP2P05387 115 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 PROZP22891 400 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CTNNA2P26232 953 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 NOP14P78316 857 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 MCL1Q07820 350 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CUL1Q13616 776 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 MAPK6Q16659 721 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 FBXO47Q5MNV8 452 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 ALS2CLQ60I27 953 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 PSRC1Q6PGN9 363 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 ZBTB33Q86T24 672 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 CPNE8Q86YQ8 564 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 WDR49Q8IV35 697 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 UBR7Q8N806 425 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 SEC14L1Q92503 715 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 BTBD6Q96KE9 485 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 OSMRQ99650 979 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 SH3GL2Q99962 352 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 JPH2Q9BR39 696 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 AGO3Q9H9G7 860 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 AVENQ9NQS1 362 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 CXXC1Q9P0U4 656 aaPredicted RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 CNOT8Q9UFF9 292 aaKnown RBP11.41□□□□□ -0.58
PKP4-206ENST00000452162 AMACRQ9UHK6 382 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 NUB1Q9Y5A7 615 aa11.41□□□□□ -0.58
PKP4-206ENST00000452162 OGTO15294 1046 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms