RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 APOA4P06727 396 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 FDX1P10109 184 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SFNP31947 248 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 TWF2Q6IBS0 349 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 FASTKD5Q7L8L6 764 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 PPIL6Q8IXY8 311 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 URGCPQ8TCY9 931 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 CNPY3Q9BT09 278 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 GDF3Q9NR23 364 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 RPL26L1Q9UNX3 145 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 COPG1Q9Y678 874 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SFI1A8K8P3 1242 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 DPYSL4O14531 572 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 COPB2P35606 906 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 APOBEC3FQ8IUX4 373 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SNRNP27Q8WVK2 155 aaKnown RBP14.56□□□□□ -0.08
ITGB4-202ENST00000449880 SCN3BQ9NY72 215 aa14.56□□□□□ -0.08
ITGB4-202ENST00000449880 NNMTP40261 264 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ELF3P78545 371 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 PTPAQ15257 358 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZBTB41Q5SVQ8 909 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 SAR1AQ9NR31 198 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 PAK5Q9P286 719 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 HERC5Q9UII4 1024 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 BCL9O00512 1426 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 POTEFA5A3E0 1075 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 TBX3O15119 743 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 MYCP01106 439 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 DAB2P98082 770 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ROR2Q01974 943 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 TTLL4Q14679 1199 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF746Q6NUN9 644 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 POTEEQ6S8J3 1075 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 STK32AQ8WU08 396 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 C9orf72Q96LT7 481 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZSWIM1Q9BR11 485 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF446Q9NWS9 450 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZC3H7BQ9UGR2 993 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 DENND3A2RUS2 1198 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 F8VZ95 297 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 GOLGA8TH3BQL2 631 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CDO1Q16878 200 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF699Q32M78 642 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 MDH1BQ5I0G3 518 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 KLHDC7AQ5VTJ3 777 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 PCNX4Q63HM2 1172 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 SLC13A5Q86YT5 568 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 GPD1LQ8N335 351 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CELF4Q9BZC1 486 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 HNRNPCL2B2RXH8 293 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 SEC24DO94855 1032 aaPredicted RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 WDR47O94967 919 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 DNAJC3Q13217 504 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 HHIPL2Q6UWX4 724 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 MAGEC3Q8TD91 643 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CYGBQ8WWM9 190 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CDC42EP5Q6NZY7 148 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 BTBD7Q9P203 1132 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 HEY2Q9UBP5 337 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 HEY1Q9Y5J3 304 aa14.55□□□□□ -0.08
ITGB4-202ENST00000449880 SAC3D1A6NKF1 404 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 PSTPIP1O43586 416 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 WEE2P0C1S8 567 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 ENO3P13929 434 aaPredicted RBP14.54□□□□□ -0.08
ITGB4-202ENST00000449880 YY1P25490 414 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 CHRNA5P30532 468 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 PRAMEP78395 509 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
ITGB4-202ENST00000449880 IZUMO2Q6UXV1 221 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 FRA10AC1Q70Z53 315 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 CDC26Q8NHZ8 85 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 PPP1R2P1Q96PQ5 205 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 GIMAP4Q9NUV9 329 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 MPP6Q9NZW5 540 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 CORO1CQ9ULV4 474 aaPredicted RBP14.54□□□□□ -0.08
ITGB4-202ENST00000449880 TRPC5OSA6NMA1 111 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 P4HBP07237 508 aaKnown RBP14.54□□□□□ -0.08
ITGB4-202ENST00000449880 THRAP10827 490 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 COMTP21964 271 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 ZNF568Q3ZCX4 644 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 RIN3Q8TB24 985 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 RNF217Q8TC41 542 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 TSPAN17Q96FV3 270 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 ALG13Q9NP73 1137 aaKnown RBP14.54□□□□□ -0.08
ITGB4-202ENST00000449880 INPP5FQ9Y2H2 1132 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 ALG6Q9Y672 507 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 TNS2Q63HR2 1409 aa14.54□□□□□ -0.08
ITGB4-202ENST00000449880 GPR75-ASB3A0A0A6YYF3 556 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms