RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 BFSP1Q12934 665 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
CHD3-205ENST00000449744 MGAT5BQ3V5L5 792 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 TANGO2Q6ICL3 276 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 ITIH5Q86UX2 942 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 CCDC105Q8IYK2 499 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 DCP1BQ8IZD4 617 aaKnown RBP16.46■□□□□ 0.23
CHD3-205ENST00000449744 LRRC52Q8N7C0 313 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 C1orf127Q8N9H9 656 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 FAM200AQ8TCP9 573 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 ELSPBP1Q96BH3 223 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 BORCS6Q96GS4 357 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 SEPT5Q99719 369 aaPredicted RBP16.46■□□□□ 0.23
CHD3-205ENST00000449744 GPR88Q9GZN0 384 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 SLITRK6Q9H5Y7 841 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 HSPBP1Q9NZL4 362 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 HSFX1Q9UBD0 423 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 SCN1AP35498 2009 aa16.46■□□□□ 0.23
CHD3-205ENST00000449744 UBE4BO95155 1302 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 TCHHQ07283 1943 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 PVALEFA0A1B0GWK0 134 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 HUS1O60921 280 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 TNNC2P02585 160 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 GJA1P17302 382 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 CASP1P29466 404 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 KRT85P78386 507 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 RBP5P82980 135 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 PRKCQQ04759 706 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 VEPH1Q14D04 833 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 TEAD2Q15562 447 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 MLF2Q15773 248 aaPredicted RBP16.45■□□□□ 0.22
CHD3-205ENST00000449744 SLC44A4Q53GD3 710 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 FAM78AQ5JUQ0 283 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 EPM2AIP1Q7L775 607 aaPredicted RBP16.45■□□□□ 0.22
CHD3-205ENST00000449744 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 C2orf15Q8WU43 125 aaKnown RBP16.45■□□□□ 0.22
CHD3-205ENST00000449744 PLA2G2FQ9BZM2 168 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 MTMR12Q9C0I1 747 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 DNAJC25Q9H1X3 360 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 SERTAD1Q9UHV2 236 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 WDFY4Q6ZS81 3184 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 TSC2P49815 1807 aa16.45■□□□□ 0.22
CHD3-205ENST00000449744 A0A1W2PRU2 124 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 MOSPD3O75425 235 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 SOAT2O75908 522 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 FGF19O95750 216 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 STARD6P59095 220 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 TSPY1Q01534 308 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 CUL4BQ13620 913 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 TAF12Q16514 161 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 LMBRD2Q68DH5 695 aaPredicted RBP16.44■□□□□ 0.22
CHD3-205ENST00000449744 POTEHQ6S545 545 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 HS2ST1Q7LGA3 356 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 DNAJB7Q7Z6W7 309 aaPredicted RBP16.44■□□□□ 0.22
CHD3-205ENST00000449744 TTC9BQ8N6N2 239 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 SHKBP1Q8TBC3 707 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 ZSCAN18Q8TBC5 510 aaPredicted RBP16.44■□□□□ 0.22
CHD3-205ENST00000449744 SPPL2BQ8TCT7 592 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 PSMG2Q969U7 264 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 SPATA32Q96LK8 384 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 ASB16Q96NS5 453 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 SLC39A2Q9NP94 309 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 INTS13Q9NVM9 706 aa16.44■□□□□ 0.22
CHD3-205ENST00000449744 CLIC2O15247 247 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 DCNP07585 359 aaKnown RBP16.43■□□□□ 0.22
CHD3-205ENST00000449744 SLFN14P0C7P3 912 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 FCARP24071 287 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 HOXD13P35453 343 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 CDR1P51861 262 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
CHD3-205ENST00000449744 MYL7Q01449 175 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 EHHADHQ08426 723 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 MYO1EQ12965 1108 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 GRM2Q14416 872 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 DUOXA2Q1HG44 320 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 TMEM86AQ8N2M4 240 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 PDCL2Q8N4E4 241 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 SCFD1Q8WVM8 642 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 ZSWIM3Q96MP5 696 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 TRMT61BQ9BVS5 477 aaKnown RBP16.43■□□□□ 0.22
CHD3-205ENST00000449744 LRRC3Q9BY71 257 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 BRD9Q9H8M2 597 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
CHD3-205ENST00000449744 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms