RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SMIM28A0A1B0GU29 152 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
HCG18-238ENST00000449544 GRM5P41594 1212 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 NLRP12P59046 1061 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 ITIH3Q06033 890 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 SMARCB1Q12824 385 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 BYSLQ13895 437 aaKnown RBP8.96□□□□□ -0.98
HCG18-238ENST00000449544 FAM102AQ5T9C2 384 aaPredicted RBP8.96□□□□□ -0.98
HCG18-238ENST00000449544 CARNMT1Q8N4J0 409 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 HDDC3Q8N4P3 179 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 TOP1MTQ969P6 601 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 IGSF21Q96ID5 467 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 TSNARE1Q96NA8 513 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 EIF2AQ9BY44 585 aaKnown RBP8.96□□□□□ -0.98
HCG18-238ENST00000449544 DCLK3Q9C098 648 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 EPC1Q9H2F5 836 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 BCAS3Q9H6U6 928 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 GOLGA2P5Q9HBQ8 144 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 TXNDC16Q9P2K2 825 aa8.96□□□□□ -0.98
HCG18-238ENST00000449544 CACNA1FO60840 1977 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 TRIM66O15016 1216 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 CREB3O43889 395 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 PCDH8O95206 1070 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 BRD1O95696 1058 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 SLC2A3P11169 496 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 SLC11A1P49279 550 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 DHPSP49366 369 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 LRRC32Q14392 662 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 DENND2CQ68D51 928 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 PDZD8Q8NEN9 1154 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 MRPL38Q96DV4 380 aaKnown RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 CBWD1Q9BRT8 395 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 TMEM175Q9BSA9 504 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 AKAP7Q9P0M2 348 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 TBX21Q9UL17 535 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ZNF862O60290 1169 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 EDNRBP24530 442 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 SKIDA1Q1XH10 827 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 EFHC2Q5JST6 749 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 MAP3K21Q5TCX8 1036 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 FAM43BQ6ZT52 329 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 DSG4Q86SJ6 1040 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ATP6V0D2Q8N8Y2 350 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 CEP120Q8N960 986 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 IGSF22Q8N9C0 903 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ST13P5Q8NFI4 369 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 TSTD1Q8NFU3 115 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 TMA16Q96EY4 203 aaKnown RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 B3GALT6Q96L58 329 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 CALN1Q9BXU9 219 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 UPF3AQ9H1J1 476 aaKnown RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 SP110Q9HB58 689 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 MYH2Q9UKX2 1941 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 TJP1Q07157 1748 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 CYP3A7-CYP3A51PA0A087WV96 503 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 CYP3A7P24462 503 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ATP5C1P36542 298 aaKnown RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 CBX2Q14781 532 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 GRIN2CQ14957 1233 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.95□□□□□ -0.98
HCG18-238ENST00000449544 LEMD2Q8NC56 503 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ABCG4Q9H172 646 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 KCNMB3Q9NPA1 279 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 ADAM22Q9P0K1 906 aa8.95□□□□□ -0.98
HCG18-238ENST00000449544 F5H5T6 163 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 SYN3O14994 580 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 TSPAN1O60635 241 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 GFPT2O94808 682 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 ACADSBP45954 432 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 DCAF6Q58WW2 860 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 ENOSF1Q7L5Y1 443 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
HCG18-238ENST00000449544 OMDQ99983 421 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 BBS2Q9BXC9 721 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 MRPL47Q9HD33 250 aaKnown RBP8.94□□□□□ -0.98
HCG18-238ENST00000449544 RAB20Q9NX57 234 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 KIF5CO60282 957 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 CHKAP35790 457 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 GRB10Q13322 594 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 ORC1Q13415 861 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 HAUS1Q96CS2 278 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 TRIM11Q96F44 468 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 SMARCD1Q96GM5 515 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 OXCT2Q9BYC2 517 aaPredicted RBP8.94□□□□□ -0.98
HCG18-238ENST00000449544 INTS13Q9NVM9 706 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 MRPL42Q9Y6G3 142 aaKnown RBP8.94□□□□□ -0.98
HCG18-238ENST00000449544 SCN9AQ15858 1988 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 LINC01553A4QN01 128 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 PFDN6O15212 129 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 SOD2P04179 222 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 GALTP07902 379 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 OR4Q2P0C623 313 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 FERP16591 822 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 CA4P22748 312 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 ATP11AP98196 1134 aa8.94□□□□□ -0.98
HCG18-238ENST00000449544 CUL4AQ13619 759 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms