RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SCARA3Q6AZY7 606 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 CCDC149Q6ZUS6 474 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 DPH6Q7L8W6 267 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 FRMD5Q7Z6J6 570 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 ADGRF2Q8IZF7 708 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 PDCL2Q8N4E4 241 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 C12orf76Q8N812 135 aaPredicted RBP15.05■□□□□ -0
GTF3C3-206ENST00000448539 CCDC150Q8NCX0 1101 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 ZNF461Q8TAF7 563 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 SRRTQ9BXP5 876 aaKnown RBP15.05■□□□□ -0
GTF3C3-206ENST00000448539 IMPG2Q9BZV3 1241 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 ADAM7Q9H2U9 754 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 TMEM8AQ9HCN3 771 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
GTF3C3-206ENST00000448539 L1RE1Q9UN81 338 aa15.05■□□□□ -0
GTF3C3-206ENST00000448539 VWA8A3KMH1 1905 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 GRXCR2A6NFK2 248 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 PRRG1O14668 218 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 STAU1O95793 577 aaKnown RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 CCDC192P0DO97 292 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 ERCC5P28715 1186 aaPredicted RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 LHX1P48742 406 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 TSPY1Q01534 308 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 PPP3CAQ08209 521 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 ZNF667Q5HYK9 610 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 PPM1LQ5SGD2 360 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 ATAT1Q5SQI0 421 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 C1orf220Q5T0J3 134 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 KRT39Q6A163 491 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 RBM43Q6ZSC3 357 aaKnown RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 CREBRFQ8IUR6 639 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 DCP1BQ8IZD4 617 aaKnown RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 SPATA18Q8TC71 538 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 TAF4BQ92750 862 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 RIPOR3Q96MK2 946 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 ZDHHC7Q9NXF8 308 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 DDX43Q9NXZ2 648 aaKnown RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 AFF4Q9UHB7 1163 aaKnown RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 MAFFQ9ULX9 164 aa15.04■□□□□ -0
GTF3C3-206ENST00000448539 USP15Q9Y4E8 981 aaPredicted RBP15.04■□□□□ -0
GTF3C3-206ENST00000448539 CCDC195A0A1B0GUA6 201 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 WDR27A2RRH5 827 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 ZMYND10O75800 440 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 ABLIM3O94929 683 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 VNN1O95497 513 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 HLA-DRAP01903 254 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 C8AP07357 584 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 OR4Q2P0C623 313 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 ATF2P15336 505 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 PCSK1P29120 753 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 MTHFRP42898 656 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 MXI1P50539 228 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 ADCY1Q08828 1119 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 SOWAHAQ2M3V2 549 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 UVSSAQ2YD98 709 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 CT47A1Q5JQC4 288 aaPredicted RBP15.03■□□□□ -0
GTF3C3-206ENST00000448539 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
GTF3C3-206ENST00000448539 RTL10Q7L3V2 364 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 SLC7A14Q8TBB6 771 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 NECTIN4Q96NY8 510 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 S1PR5Q9H228 398 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 SNX25Q9H3E2 840 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 VRTNQ9H8Y1 702 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 PIDD1Q9HB75 910 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 CYP4F11Q9HBI6 524 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 ANO10Q9NW15 660 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 SCN1AP35498 2009 aa15.03■□□□□ -0
GTF3C3-206ENST00000448539 BDP1A6H8Y1 2624 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 XYLBO75191 536 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 RFPL2O75678 378 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 HNRNPA1P09651 372 aaKnown RBP eCLIP15.02■□□□□ -0
GTF3C3-206ENST00000448539 FAM163BP0C2L3 166 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 IL9P15248 144 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 MCCD1P59942 119 aaPredicted RBP15.02■□□□□ -0
GTF3C3-206ENST00000448539 CETN1Q12798 172 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 SMARCB1Q12824 385 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 GPR17Q13304 367 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 SMAD2Q15796 467 aaKnown RBP15.02■□□□□ -0
GTF3C3-206ENST00000448539 SLC39A12Q504Y0 691 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 CYP26C1Q6V0L0 522 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 RNF19BQ6ZMZ0 732 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 C15orf39Q6ZRI6 1047 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 GPR149Q86SP6 731 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 OR10T2Q8NGX3 314 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 SMG7Q92540 1137 aaKnown RBP15.02■□□□□ -0
GTF3C3-206ENST00000448539 PGLYRP2Q96PD5 576 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 ACBD6Q9BR61 282 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 ZCWPW1Q9H0M4 648 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 XYLT2Q9H1B5 865 aa15.02■□□□□ -0
GTF3C3-206ENST00000448539 N4BP1O75113 896 aaKnown RBP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 TACC1O75410 805 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 LRG1P02750 347 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 WEE2P0C1S8 567 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 WARSP23381 471 aaKnown RBP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 HOXA9P31269 272 aa15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 GNL1P36915 607 aaPredicted RBP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 CBX2Q14781 532 aaPredicted RBP15.01□□□□□ -0.01
GTF3C3-206ENST00000448539 STX1AQ16623 288 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms