RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 IL9P15248 144 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 GLUD2P49448 558 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 FANCCQ00597 558 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 LRMPQ12912 555 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 EXOC3L4Q17RC7 722 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 MIIPQ5JXC2 388 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 TMEM130Q8N3G9 435 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 NT5C1BQ96P26 610 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 NECAB3Q96P71 396 aaPredicted RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 CRACR2AQ9BSW2 395 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 PI4K2AQ9BTU6 479 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 GPR62Q9BZJ7 368 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 INTS2Q9H0H0 1204 aaKnown RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 RBSNQ9H1K0 784 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 MRPL17Q9NRX2 175 aaKnown RBP12.42□□□□□ -0.42
LINC00408-201ENST00000447784 GDAP2Q9NXN4 497 aa12.42□□□□□ -0.42
LINC00408-201ENST00000447784 H7C4K7 107 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 HOXB8P17481 243 aaPredicted RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 TRIM21P19474 475 aaKnown RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 TYMPP19971 482 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 UBASH3AP57075 661 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 NOP14P78316 857 aaKnown RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 CREMQ03060 361 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 YWHAHQ04917 246 aaPredicted RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 DPH6Q7L8W6 267 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 GAS2L3Q86XJ1 694 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 GPR65Q8IYL9 337 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 TMEM86AQ8N2M4 240 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 TOP6BLQ8N6T0 577 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 RIN2Q8WYP3 895 aaPredicted RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 CASP10Q92851 521 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 SEMA4DQ92854 862 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 FAM81BQ96LP2 452 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 HERC2P3Q9BVR0 1158 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 VN1R3Q9BXE9 311 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 VRTNQ9H8Y1 702 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
LINC00408-201ENST00000447784 KIAA1671Q9BY89 1806 aa12.41□□□□□ -0.42
LINC00408-201ENST00000447784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 M0QZQ0 153 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 C2CD2LO14523 706 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 LILRB3O75022 631 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 CLASP2O75122 1294 aaKnown RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 FAM163BP0C2L3 166 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 FGFR3P22607 806 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 TBXAS1P24557 533 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 YWHAEP62258 255 aaKnown RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 WSCD1Q658N2 575 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 PPFIBP1Q86W92 1011 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 PPM1KQ8N3J5 372 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 TTC39CQ8N584 583 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 FAXDC2Q96IV6 333 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 B3GALT6Q96L58 329 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 EMILIN2Q9BXX0 1053 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 CYP3A43Q9HB55 503 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 IFNKQ9P0W0 207 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 TIMM13Q9Y5L4 95 aaPredicted RBP12.4□□□□□ -0.42
LINC00408-201ENST00000447784 HCFC2Q9Y5Z7 792 aa12.4□□□□□ -0.42
LINC00408-201ENST00000447784 SPTBN5Q9NRC6 3674 aaKnown RBP12.39□□□□□ -0.43
LINC00408-201ENST00000447784 SLC9A1P19634 815 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 PON1P27169 355 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 GNL1P36915 607 aaPredicted RBP12.39□□□□□ -0.43
LINC00408-201ENST00000447784 LHX1P48742 406 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 MFAP3P55082 362 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 RBM10P98175 930 aaKnown RBP12.39□□□□□ -0.43
LINC00408-201ENST00000447784 DSG1Q02413 1049 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 SYCP1Q15431 976 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 CLUL1Q15846 466 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 UVSSAQ2YD98 709 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 CTXN3Q4LDR2 81 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
LINC00408-201ENST00000447784 SCARA3Q6AZY7 606 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 SPOPLQ6IQ16 392 aa12.39□□□□□ -0.43
LINC00408-201ENST00000447784 ZNF280DQ6N043 979 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms