RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SYN3O14994 580 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 TACC1O75410 805 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 PDGFRBP09619 1106 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 TYMPP19971 482 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 WARSP23381 471 aaKnown RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 MAPK8IP2Q13387 824 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 ORC1Q13415 861 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 DRAP1Q14919 205 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 VARS2Q5ST30 1063 aaKnown RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 SPECC1LQ69YQ0 1117 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 OVOS1Q6IE37 1185 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 DPH6Q7L8W6 267 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 METTL23Q86XA0 190 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 OR6B3Q8NGW1 331 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 GDPD5Q8WTR4 605 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 CPLX3Q8WVH0 158 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 POF1BQ8WVV4 589 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 RIN2Q8WYP3 895 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 TTYH3Q9C0H2 523 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 SNX25Q9H3E2 840 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 CEP72Q9P209 647 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 DSEQ9UL01 958 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 PCDHB4Q9Y5E5 795 aa19.23■□□□□ 0.67
TRAPPC4-203ENST00000447216 ARHGEF37A1IGU5 675 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 RFXAPO00287 272 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 ACO1P21399 889 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 ACAT1P24752 427 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 LMO2P25791 158 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 GNL1P36915 607 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 USP8P40818 1118 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 GLUD2P49448 558 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 NDST1P52848 882 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 YWHAHQ04917 246 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 ZNF394Q53GI3 561 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 KIAA1841Q6NSI8 718 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 CACNA2D4Q7Z3S7 1137 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 TMEM86AQ8N2M4 240 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 FAXDC2Q96IV6 333 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 TWNKQ96RR1 684 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 RTP3Q9BQQ7 232 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 GPR88Q9GZN0 384 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 ZBP1Q9H171 429 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 CHST7Q9NS84 486 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 DDX43Q9NXZ2 648 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 PCDHGC5Q9Y5F6 944 aa19.22■□□□□ 0.67
TRAPPC4-203ENST00000447216 H3BNC9 293 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 FOXN3O00409 490 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 GABRDO14764 452 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 CALCAP01258 141 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 GYPCP04921 128 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 URODP06132 367 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 KRT5P13647 590 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 RFX1P22670 979 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 CA8P35219 290 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 PLXNA3P51805 1871 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 ERVFC1P60507 584 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 YWHAEP62258 255 aaKnown RBP19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 DSG1Q02413 1049 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 GOLGA8FQ08AF8 430 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 GOLGA8DPQ0D2H9 430 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 INCA1Q0VD86 236 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 ENOSF1Q7L5Y1 443 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 DRC7Q8IY82 874 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 SPC24Q8NBT2 197 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 WHAMMQ8TF30 809 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 SHC3Q92529 594 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 BAP1Q92560 729 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 TMEM209Q96SK2 561 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 NUP58Q9BVL2 599 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 STK33Q9BYT3 514 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 ELOVL4Q9GZR5 314 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 DPEP3Q9H4B8 488 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 FBXL5Q9UKA1 691 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 BARX2Q9UMQ3 279 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 LZTS1Q9Y250 596 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 PTPRDP23468 1912 aa19.21■□□□□ 0.67
TRAPPC4-203ENST00000447216 A8MXQ7 604 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 ATP2C2O75185 946 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CILPO75339 1184 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 RPL17P18621 184 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CDC25BP30305 580 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 FXR1P51114 621 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CDR1P51861 262 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 JAM2P57087 298 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CAMK1Q14012 370 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 MRPL58Q14197 206 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 PSMD5Q16401 504 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CCDC142Q17RM4 750 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 CTXN3Q4LDR2 81 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 FIGNQ5HY92 759 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 KIAA0319Q5VV43 1072 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 PLPP4Q5VZY2 271 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 TMEM270Q6UE05 265 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 TMC7Q7Z402 723 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 PPFIBP1Q86W92 1011 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 RBBP8NLQ8NC74 664 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 OR10T2Q8NGX3 314 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms