RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 DDX19AQ9NUU7 478 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 STMN3Q9NZ72 180 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SH3BGRL2Q9UJC5 107 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ERVK-19Q9WJR5 959 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 CCDC78A2IDD5 438 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 LRRIQ4A6NIV6 560 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SIGLEC16A6NMB1 481 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 AQP9O43315 295 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SSX5O60225 188 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 BAG2O95816 211 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 URODP06132 367 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 CPB1P15086 417 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ITGA2P17301 1181 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 GSTM2P28161 218 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 MSH2P43246 934 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SLC9A3P48764 834 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 MAN2A2P49641 1150 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SULT1E1P49888 294 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 OCRLQ01968 901 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TMPRSS9Q7Z410 1059 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SFR1Q86XK3 245 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ADAMTS16Q8TE57 1224 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 DNAJC1Q96KC8 554 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TMEM68Q96MH6 324 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 IFIH1Q9BYX4 1025 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ZFYVE28Q9HCC9 887 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 SYTL2Q9HCH5 934 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 TUFT1Q9NNX1 390 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 FAM8A1Q9UBU6 413 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 RBMX2Q9Y388 322 aaKnown RBP9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 IPPQ9Y573 584 aa9.09□□□□□ -0.95
MCF2L2-203ENST00000447025 C15orf38-AP3S2A0A0A6YYH1 394 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 WDR91A4D1P6 747 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PSMD9O00233 223 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 FYB1O15117 783 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SLC22A1O15245 554 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SCO2O43819 266 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 RSL1D1O76021 490 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TPBGLP0DKB5 382 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PDGFRAP16234 1089 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 EEF1A1P68104 462 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 FANCCQ00597 558 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 KCNC4Q03721 635 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 EEF1A2Q05639 463 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TRIM14Q14142 442 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 MAPKAPK3Q16644 382 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 LSM12Q3MHD2 195 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 KCTD21Q4G0X4 260 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 EEF1A1P5Q5VTE0 462 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 LIMS2Q7Z4I7 341 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SPATA5Q8NB90 893 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PCSK9Q8NBP7 692 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PANK1Q8TE04 598 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 NMD3Q96D46 503 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 HES6Q96HZ4 224 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 FAR2Q96K12 515 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TFB2MQ9H5Q4 396 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SP110Q9HB58 689 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 GPHNQ9NQX3 736 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 CPSF3Q9UKF6 684 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 DOLKQ9UPQ8 538 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PPP2R2CQ9Y2T4 447 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TMX2Q9Y320 296 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 UGGT1Q9NYU2 1555 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 UBXN8O00124 270 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 POLR2DO15514 142 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SIN3BO75182 1162 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ATP5HO75947 161 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ALDH1A2O94788 518 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PCSK2P16519 638 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SYN1P17600 705 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 PMLP29590 882 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SHMT1P34896 483 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ADH7P40394 386 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 NKX2-5P52952 324 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 USP14P54578 494 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ADAM17P78536 824 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ERV3-1Q14264 604 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TIGD2Q4W5G0 525 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 CCNJQ5T5M9 372 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 FAM205BPQ63HN1 556 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 DUPD1Q68J44 220 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 UBE3BQ7Z3V4 1068 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 ARFGAP2Q8N6H7 521 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 SLC4A11Q8NBS3 891 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 GANCQ8TET4 914 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 GRK7Q8WTQ7 553 aa9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 CCDC12Q8WUD4 166 aaPredicted RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 TOE1Q96GM8 510 aaKnown RBP9.08□□□□□ -0.96
MCF2L2-203ENST00000447025 MED15Q96RN5 788 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms