RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HPDLQ96IR7 371 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 FAXDC2Q96IV6 333 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ZIM3Q96PE6 472 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ERP44Q9BS26 406 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 EIF2AQ9BY44 585 aaKnown RBP18.52■□□□□ 0.56
SMC6-206ENST00000446852 GCOM2Q9BZD3 368 aaPredicted RBP18.52■□□□□ 0.56
SMC6-206ENST00000446852 ZNF518BQ9C0D4 1074 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 PCYOX1Q9UHG3 505 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 CYTH4Q9UIA0 394 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 CILPO75339 1184 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 FLT3P36888 993 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
SMC6-206ENST00000446852 RGS2P41220 211 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 PSEN2P49810 448 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 DMTNQ08495 405 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ZNF252P-AS1Q0IIN9 211 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 DCAF4L1Q3SXM0 396 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ALS2CLQ60I27 953 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 SMYD5Q6GMV2 418 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 IQCKQ8N0W5 287 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 SH3GL2Q99962 352 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ELOVL4Q9GZR5 314 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 RAB17Q9H0T7 212 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 DPP3Q9NY33 737 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 ITGA11Q9UKX5 1188 aa18.52■□□□□ 0.56
SMC6-206ENST00000446852 FAM187AA6NFU0 413 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 TMEM191CA6NGB0 347 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 FSCN2O14926 492 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 SLC10A3P09131 477 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 CTGFP29279 349 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
SMC6-206ENST00000446852 CYP4A22Q5TCH4 519 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 CCDC137Q6PK04 289 aaKnown RBP18.51■□□□□ 0.55
SMC6-206ENST00000446852 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.51■□□□□ 0.55
SMC6-206ENST00000446852 DNAJB3Q8WWF6 145 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 KIF12Q96FN5 646 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 APBA2Q99767 749 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 FAM114A2Q9NRY5 505 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 MTUS1Q9ULD2 1270 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 USTQ9Y2C2 406 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 TREHO43280 583 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 HSF2BPO75031 334 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 MYL3P08590 195 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 PAEPP09466 180 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 DARSP14868 501 aaKnown RBP18.51■□□□□ 0.55
SMC6-206ENST00000446852 CPT1AP50416 773 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 PPP1R15BQ5SWA1 713 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 SLC27A1Q6PCB7 646 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 TMEM40Q8WWA1 233 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 MCEEQ96PE7 176 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 PLVAPQ9BX97 442 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 SNTG2Q9NY99 539 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 TJP2Q9UDY2 1190 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 HES2Q9Y543 173 aa18.51■□□□□ 0.55
SMC6-206ENST00000446852 PSTPIP1O43586 416 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 CRHR2Q13324 411 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 PTPN20Q4JDL3 420 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 DNAJC24Q6P3W2 148 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 ERICH1Q86X53 443 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 C12orf50Q8NA57 414 aaPredicted RBP18.5■□□□□ 0.55
SMC6-206ENST00000446852 ZMAT2Q96NC0 199 aaKnown RBP18.5■□□□□ 0.55
SMC6-206ENST00000446852 FAM204AQ9H8W3 233 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMC6-206ENST00000446852 TNPO2O14787 897 aaKnown RBP18.5■□□□□ 0.55
SMC6-206ENST00000446852 TCF4P15884 667 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 MAN1A1P33908 653 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 COILP38432 576 aaPredicted RBP18.5■□□□□ 0.55
SMC6-206ENST00000446852 OGDHQ02218 1023 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 PTPN11Q06124 597 aaPredicted RBP18.5■□□□□ 0.55
SMC6-206ENST00000446852 NT5DC4Q86YG4 428 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 RHOT1Q8IXI2 618 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 CYP3A43Q9HB55 503 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 IP6K2Q9UHH9 426 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 CEP83Q9Y592 693 aa18.5■□□□□ 0.55
SMC6-206ENST00000446852 FAM155AB1AL88 458 aaPredicted RBP18.49■□□□□ 0.55
SMC6-206ENST00000446852 RBP5P82980 135 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 CDC42EP1Q00587 391 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 CFAP58Q5T655 872 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 SNX27Q96L92 541 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 MED7O43513 233 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 KCNJ1P48048 391 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 UAP1Q16222 522 aaPredicted RBP18.49■□□□□ 0.55
SMC6-206ENST00000446852 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 CD302Q8IX05 232 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 C3orf20Q8ND61 904 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 SOCS4Q8WXH5 440 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 TMEM176AQ96HP8 235 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 AP5M1Q9H0R1 490 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 NXF3Q9H4D5 531 aaKnown RBP18.49■□□□□ 0.55
SMC6-206ENST00000446852 LRRC19Q9H756 370 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 ZDHHC18Q9NUE0 388 aa18.49■□□□□ 0.55
SMC6-206ENST00000446852 STAU1O95793 577 aaKnown RBP18.48■□□□□ 0.55
SMC6-206ENST00000446852 P4HA1P13674 534 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 GJC1P36383 396 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 ANKS1BQ7Z6G8 1248 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 KATNAL2Q8IYT4 538 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 C1orf54Q8WWF1 131 aa18.48■□□□□ 0.55
SMC6-206ENST00000446852 ZFYVE28Q9HCC9 887 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms