RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ZNF576Q9H609 170 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TMEM8AQ9HCN3 771 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 HSPBP1Q9NZL4 362 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SLC39A10Q9ULF5 831 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SCAF8Q9UPN6 1271 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 LIPT1Q9Y234 373 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 IGSF1Q8N6C5 1336 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 GTPBP1O00178 669 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 IFNB1P01574 187 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TXNP10599 105 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 RARGP13631 454 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CSF2RAP15509 400 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 GFRA1P56159 465 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TFAP4Q01664 338 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 YWHAHQ04917 246 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 KIF5AQ12840 1032 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 AIMP1Q12904 312 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 ACAP2Q15057 778 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CYP27C1Q4G0S4 372 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SLC35F1Q5T1Q4 408 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CEP135Q66GS9 1140 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PTCHD4Q6ZW05 846 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 OVCH1Q7RTY7 1134 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SCUBE3Q8IX30 993 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 BBOF1Q8ND07 529 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 ZNF280CQ8ND82 737 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 P2RX7Q99572 595 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 NTMT1Q9BV86 223 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 KCNH6Q9H252 994 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 FBXO40Q9UH90 709 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 FAM169AQ9Y6X4 670 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TNIKQ9UKE5 1360 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TRAV6A0A075B6T7 132 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TLR2O60603 784 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PEX11AO75192 247 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CYP2E1P05181 493 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 TYMPP19971 482 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CDH3P22223 829 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CHMLP26374 656 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PRKAR1BP31321 381 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CSTF2P33240 577 aaKnown RBP eCLIP4.23□□□□□ -1.73
UBR3-206ENST00000444475 BMPR1AP36894 532 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TXLNAP40222 546 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 AP3M2P53677 418 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PLTPP55058 493 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 MRPS5P82675 430 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 CHIT1Q13231 466 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 DPYSQ14117 519 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 FAM47CQ5HY64 1035 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SCARA3Q6AZY7 606 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CORO6Q6QEF8 472 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CELF5Q8N6W0 485 aaKnown RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 EFHBQ8N7U6 833 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 IGSF22Q8N9C0 903 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 ZNF511Q8NB15 262 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 ATP11CQ8NB49 1132 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 LILRB4Q8NHJ6 448 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 IL31RAQ8NI17 732 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 STK35Q8TDR2 534 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 RIN2Q8WYP3 895 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 RAB7BQ96AH8 199 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PGAP3Q96FM1 320 aaPredicted RBP4.23□□□□□ -1.73
UBR3-206ENST00000444475 PLEKHG4BQ96PX9 1271 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 NUDCD1Q96RS6 583 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 HEPHQ9BQS7 1158 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 FOXP3Q9BZS1 431 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 MS4A5Q9H3V2 200 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PRDM9Q9NQV7 894 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TRPM5Q9NZQ8 1165 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 CAMK2AQ9UQM7 478 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 PCDHA9Q9Y5H5 950 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 SPO11Q9Y5K1 396 aa4.23□□□□□ -1.73
UBR3-206ENST00000444475 ZNF608Q9ULD9 1512 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 AQP12BA6NM10 295 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 POTEB2H3BUK9 544 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CETN3O15182 167 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 POLR2DO15514 142 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 CLEC3BP05452 202 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ANXA6P08133 673 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 GP5P40197 560 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 IL12RB1P42701 662 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CDK8P49336 464 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 IDH3AP50213 366 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 CLCN4P51793 760 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 KPNA1P52294 538 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 GMFBP60983 142 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 DEUP1Q05D60 604 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 RPA4Q13156 261 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 ADAM9Q13443 819 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 SEC23AQ15436 765 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 PFKFB3Q16875 520 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 CCDC152Q4G0S7 254 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 USP39Q53GS9 565 aaKnown RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 ATPAF1Q5TC12 328 aaPredicted RBP4.22□□□□□ -1.73
UBR3-206ENST00000444475 GARNL3Q5VVW2 1013 aa4.22□□□□□ -1.73
UBR3-206ENST00000444475 OTOP1Q7RTM1 612 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms