RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 BICD1Q96G01 975 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 FNBP1Q96RU3 617 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 FAM167BQ9BTA0 163 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 DDX56Q9NY93 547 aaKnown RBP16.29■□□□□ 0.2
AP1S3-206ENST00000443700 USP21Q9UK80 565 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
AP1S3-206ENST00000443700 PSME4Q14997 1843 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 EXTL3O43909 919 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 HLA-DRAP01903 254 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 ITGAVP06756 1048 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 CLDN10P78369 228 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 SPP2Q13103 211 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PSMD6Q15008 389 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PLA2G4FQ68DD2 849 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 NAIF1Q69YI7 327 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PHLDB2Q86SQ0 1253 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 GRID1Q9ULK0 1009 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 CCDC22O60826 627 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 HAUS5O94927 633 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 CALCAP01258 141 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 TSHRP16473 764 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 RTP1P59025 263 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PDIA2Q13087 525 aaKnown RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 CUL2Q13617 745 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 MUM1Q2TAK8 710 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 ZACNQ401N2 412 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 SPOCD1Q6ZMY3 1216 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 APBB1IPQ7Z5R6 666 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 CLNKQ7Z7G1 428 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 RBBP8NLQ8NC74 664 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 MCPH1Q8NEM0 835 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 DNAJC9Q8WXX5 260 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 FAM213AQ9BRX8 229 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 FHDC1Q9C0D6 1143 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-206ENST00000443700 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
AP1S3-206ENST00000443700 TMEM150BA6NC51 233 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 SMAPO00193 183 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 CBX6O95503 412 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 CALB1P05937 261 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 LINGO3P0C6S8 592 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 DSG3P32926 999 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 VHLP40337 213 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 PTGER2P43116 358 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 PTDSS1P48651 473 aaKnown RBP16.27■□□□□ 0.2
AP1S3-206ENST00000443700 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
AP1S3-206ENST00000443700 TAP1Q03518 808 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 KLC1Q07866 573 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 OASLQ15646 514 aaKnown RBP16.27■□□□□ 0.2
AP1S3-206ENST00000443700 HIF1AQ16665 826 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 KAZNQ674X7 775 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 ANO7Q6IWH7 933 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 TRIM55Q9BYV6 548 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 NPHS2Q9NP85 383 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 KCNG1Q9UIX4 513 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 SIP14410 1827 aa16.27■□□□□ 0.2
AP1S3-206ENST00000443700 AHCYL1O43865 530 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 NPTXRO95502 500 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 NEFHP12036 1026 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 GM2AP17900 193 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 KRT4P19013 534 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ATP4AP20648 1035 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ACO1P21399 889 aaKnown RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 CDC25CP30307 473 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 CAP2P40123 477 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ARL4CP56559 192 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 FASTKD3Q14CZ7 662 aaKnown RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 CCDC6Q16204 474 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ZNF483Q8TF39 744 aaPredicted RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 FAM151AQ8WW52 585 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 AGBL1Q96MI9 1066 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 SH3GL3Q99963 347 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 VPS11Q9H270 941 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 VCXQ9H320 206 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 DENND2DQ9H6A0 471 aaPredicted RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 hCG_1818297A0A087WSY0 165 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 NFIBO00712 420 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 NVLO15381 856 aaKnown RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 TNNI1P19237 187 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 CTCFP49711 727 aaPredicted RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
AP1S3-206ENST00000443700 C2CD6Q53TS8 623 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 ADGRD1Q6QNK2 874 aa16.26■□□□□ 0.19
AP1S3-206ENST00000443700 MFSD7Q6UXD7 560 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms