RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CPA5Q8WXQ8 436 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 PTPRN2Q92932 1015 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 CCDC127Q96BQ5 260 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.02
SHOX2-203ENST00000441443 GOLGA8SH3BPF8 625 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 GOLGA8MH3BSY2 632 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 CYP1A1P04798 512 aaPredicted RBP21.4■■□□□ 1.02
SHOX2-203ENST00000441443 CENPCQ03188 943 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 SPDYAQ5MJ70 313 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 SHC3Q92529 594 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 WDR18Q9BV38 432 aa21.4■■□□□ 1.02
SHOX2-203ENST00000441443 HNRNPCL1O60812 293 aaKnown RBP21.39■■□□□ 1.02
SHOX2-203ENST00000441443 SLC18A1P54219 525 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 PPP2R5CQ13362 524 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 MTM1Q13496 603 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 CDAN1Q8IWY9 1227 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 DAW1Q8N136 415 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 ARMCX1Q9P291 453 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 SLC17A7Q9P2U7 560 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 USTQ9Y2C2 406 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 UBE4BO95155 1302 aa21.39■■□□□ 1.02
SHOX2-203ENST00000441443 GRIN3BO60391 1043 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 LYNP07948 512 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 ESRRAP11474 423 aaPredicted RBP21.39■■□□□ 1.01
SHOX2-203ENST00000441443 KRT5P13647 590 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 MFAP3P55082 362 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 LMNB2Q03252 620 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 TDRPQ86YL5 185 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 VTI1AQ96AJ9 217 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 OSBPL8Q9BZF1 889 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 TUFT1Q9NNX1 390 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 G3BP2Q9UN86 482 aaKnown RBP21.39■■□□□ 1.01
SHOX2-203ENST00000441443 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.39■■□□□ 1.01
SHOX2-203ENST00000441443 ATRNL1Q5VV63 1379 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 ARFIP2P53365 341 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 TCP10LQ8TDR4 215 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 TUBGCP5Q96RT8 1024 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 IDI2Q9BXS1 227 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 SENP1Q9P0U3 644 aa21.39■■□□□ 1.01
SHOX2-203ENST00000441443 PLSCR1O15162 318 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 ETS2P15036 469 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 CIITAP33076 1130 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 TAS2R40P59535 323 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 MCL1Q07820 350 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 CNPY1Q3B7I2 92 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 LRRC23Q53EV4 343 aaPredicted RBP21.38■■□□□ 1.01
SHOX2-203ENST00000441443 DDX1Q92499 740 aaKnown RBP21.38■■□□□ 1.01
SHOX2-203ENST00000441443 ITFG2Q969R8 447 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 TRIM55Q9BYV6 548 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 HSPBP1Q9NZL4 362 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 PKD2L1Q9P0L9 805 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 PDP2Q9P2J9 529 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 SCN9AQ15858 1988 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 IGLV3-22A0A075B6J6 115 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 KRT10P13645 584 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 GPS1Q13098 491 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 FAM161BQ96MY7 647 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 SH2D3AQ9BRG2 576 aa21.38■■□□□ 1.01
SHOX2-203ENST00000441443 YDJCA8MPS7 323 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PI4K2BG5E9Z4 385 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 USP4Q13107 963 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 DYNC1I2Q13409 638 aaKnown RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 FAM81AQ8TBF8 368 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 MKL1Q969V6 931 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 TMEM120AQ9BXJ8 343 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PDGFDQ9GZP0 370 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PSMC3IPQ9P2W1 217 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 DNPEPQ9ULA0 475 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ZNF148Q9UQR1 794 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PGM1P36871 562 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ARSEP51690 589 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PDIA2Q13087 525 aaKnown RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 CLEC16AQ2KHT3 1053 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ZFYVE27Q5T4F4 411 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 IZUMO2Q6UXV1 221 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ZNF276Q8N554 614 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 XXYLT1Q8NBI6 393 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 FAM84AQ96KN4 292 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 TTC25Q96NG3 672 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 NDNQ99608 321 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 MANSC1Q9H8J5 431 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ZNF212Q9UDV6 495 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 PRR12Q9ULL5 1215 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ARHGEF35A5YM69 484 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 DNALI1O14645 258 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 P4HA2O15460 535 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 ADRB2P07550 413 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 CC2D2BQ6DHV5 1058 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 DMAP1Q9NPF5 467 aaPredicted RBP21.37■■□□□ 1.01
SHOX2-203ENST00000441443 TMOD2Q9NZR1 351 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 SERPINA10Q9UK55 444 aa21.37■■□□□ 1.01
SHOX2-203ENST00000441443 FOSP01100 380 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-203ENST00000441443 ATP13A4Q4VNC1 1196 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 FBXO27Q8NI29 283 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 ZNF398Q8TD17 642 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 HELQQ8TDG4 1101 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 NACC1Q96RE7 527 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 CYTH2Q99418 400 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms