RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 ZNF653Q96CK0 615 aa8.29□□□□□ -1.08
LMO3-208ENST00000441439 MAK16Q9BXY0 300 aaKnown RBP8.29□□□□□ -1.08
LMO3-208ENST00000441439 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
LMO3-208ENST00000441439 STN1Q9H668 368 aaKnown RBP8.29□□□□□ -1.08
LMO3-208ENST00000441439 ZNF696Q9H7X3 374 aa8.29□□□□□ -1.08
LMO3-208ENST00000441439 S100A14Q9HCY8 104 aa8.29□□□□□ -1.08
LMO3-208ENST00000441439 NPHS2Q9NP85 383 aa8.29□□□□□ -1.08
LMO3-208ENST00000441439 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
LMO3-208ENST00000441439 SPOPO43791 374 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 LDHCP07864 332 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CD48P09326 243 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CA4P22748 312 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 AMPD1P23109 780 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 STIP1P31948 543 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 ADCY8P40145 1251 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TNNI2P48788 182 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CD97P48960 835 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 IRX4P78413 519 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TNIP1Q15025 636 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 GPATCH4Q5T3I0 446 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 POTEGQ6S5H5 508 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZBTB8BQ8NAP8 495 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 TMEM120AQ9BXJ8 343 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 STX8Q9UNK0 236 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 COQ4Q9Y3A0 265 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ASTN2O75129 1339 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 TTLL13PA6NNM8 815 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZBTB5O15062 677 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 SPATA31D3P0C874 917 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 AOC1P19801 751 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 RPL5P46777 297 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 BPIFB4P59827 614 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 MSLNQ13421 630 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 KCTD19Q17RG1 926 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 KLHL38Q2WGJ6 581 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CRY2Q49AN0 593 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ANKRD20A4Q4UJ75 823 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 C6orf163Q5TEZ5 329 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 PCNX4Q63HM2 1172 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 RINT1Q6NUQ1 792 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 SPATA31D4Q6ZUB0 917 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 DHDDSQ86SQ9 333 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZNF554Q86TJ5 538 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZBED8Q8IZ13 594 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 EXD1Q8NHP7 514 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 COA7Q96BR5 231 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CCDC106Q9BWC9 280 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 PCDH18Q9HCL0 1135 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 MTMR4Q9NYA4 1195 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TAGLN3Q9UI15 199 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 EXOC7Q9UPT5 735 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 DMTF1Q9Y222 760 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 SPAG7O75391 227 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CIB2O75838 187 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 UBTFL6P0CB48 400 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 FDX1P10109 184 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CHN2P52757 468 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 GABPAQ06546 454 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 USP4Q13107 963 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 APOFQ13790 326 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 RNASEH2BQ5TBB1 312 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 PPP1R2P3Q6NXS1 205 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZNF677Q86XU0 584 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 CROCCP3Q8IVE0 287 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ULK2Q8IYT8 1036 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 NUP93Q8N1F7 819 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 PDCD7Q8N8D1 485 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 HERPUD2Q9BSE4 406 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TSSK1BQ9BXA7 367 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 FRMD8P1Q9BZ68 369 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 TBK1Q9UHD2 729 aa8.28□□□□□ -1.08
LMO3-208ENST00000441439 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 FARP1Q9Y4F1 1045 aaPredicted RBP8.28□□□□□ -1.08
LMO3-208ENST00000441439 FCHO1O14526 889 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 FAM189A1O60320 539 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 GCNT3O95395 438 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 CPOXP36551 454 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
LMO3-208ENST00000441439 SESN3P58005 492 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 PSMC6P62333 389 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
LMO3-208ENST00000441439 MED21Q13503 144 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 RASA3Q14644 834 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 C1orf220Q5T0J3 134 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 PCGF5Q86SE9 256 aa8.27□□□□□ -1.09
LMO3-208ENST00000441439 SYCP3Q8IZU3 236 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms