RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 AP3M2P53677 418 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 ADAM9Q13443 819 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 SOWAHAQ2M3V2 549 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 TDRD10Q5VZ19 366 aaKnown RBP17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 DPH6Q7L8W6 267 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 TMEM86AQ8N2M4 240 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 ATAD1Q8NBU5 361 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 ACSF2Q96CM8 615 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 MYADMQ96S97 322 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 XYLT2Q9H1B5 865 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 HCFC1R1Q9NWW0 138 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 POLIQ9UNA4 740 aa17.12■□□□□ 0.33
TRAPPC12-209ENST00000441099 STAU1O95793 577 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 LRG1P02750 347 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 PMS1P54277 932 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 MYL6P60660 151 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 DUSP4Q13115 394 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 SLC39A12Q504Y0 691 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 SPATA18Q8TC71 538 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 LIMD1Q9UGP4 676 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 SLC27A5Q9Y2P5 690 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 YIPF1Q9Y548 306 aa17.11■□□□□ 0.33
TRAPPC12-209ENST00000441099 NCOR1O75376 2440 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 VWA8A3KMH1 1905 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 CITO14578 2027 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 IKBKBO14920 756 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 VNN1O95497 513 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 FSHRP23945 695 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ATICP31939 592 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 VAMP7P51809 220 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ENPEPQ07075 957 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 TWF1Q12792 350 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 TRPC3Q13507 836 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 MORC3Q14149 939 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ANKRD40Q6AI12 368 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 INTS8Q75QN2 995 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ZC3H3Q8IXZ2 948 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ADGRF2Q8IZF7 708 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 TTC9BQ8N6N2 239 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 EEF2KMTQ96G04 330 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 ACBD6Q9BR61 282 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 AVENQ9NQS1 362 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 DDX43Q9NXZ2 648 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 CEP72Q9P209 647 aa17.1■□□□□ 0.33
TRAPPC12-209ENST00000441099 HCRTO43612 131 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PHACTR2O75167 634 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 RHOP08100 348 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PTPN2P17706 415 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 GBP2P32456 591 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 LHX1P48742 406 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 BIRC3Q13489 604 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 NCOA4Q13772 614 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 ZACNQ401N2 412 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PABPC1LQ4VXU2 614 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 SV2AQ7L0J3 742 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 GET4Q7L5D6 327 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 ITFG1Q8TB96 612 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PKMYT1Q99640 499 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 MKNK1Q9BUB5 465 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 VRTNQ9H8Y1 702 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 HSFX1Q9UBD0 423 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
TRAPPC12-209ENST00000441099 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 CETN3O15182 167 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 TACC1O75410 805 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 ASGR2P07307 311 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 FAM163BP0C2L3 166 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 LAMP2P13473 410 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 WARSP23381 471 aaKnown RBP17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 CCNE1P24864 410 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 LMO2P25791 158 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 CDR1P51861 262 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 MYL7Q01449 175 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 CAMK4Q16566 473 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 SLC5A9Q2M3M2 681 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
TRAPPC12-209ENST00000441099 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms