RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 DLG5Q8TDM6 1919 aa4.09□□□□□ -1.76
HMGB3P11-201ENST00000440127 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 GABRDO14764 452 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 TEX33O43247 280 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ITGA10O75578 1167 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 STC2O76061 302 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 SNRPA1P09661 255 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 GSPT1P15170 499 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ATF3P18847 181 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 EIF2S2P20042 333 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ECHS1P30084 290 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ID4P47928 161 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ZNF142P52746 1687 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 LGALS4P56470 323 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 EIF4A1P60842 406 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 MRPS9P82933 396 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 SPDYE7PQ495Y7 208 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 RRP12Q5JTH9 1297 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 C1orf141Q5JVX7 400 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 DRC7Q8IY82 874 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 LCORLQ8N3X6 602 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 COG1Q8WTW3 980 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 CEMIPQ8WUJ3 1361 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 LRRC59Q96AG4 307 aaKnown RBP4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 CHMP4CQ96CF2 233 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 HOOK2Q96ED9 719 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 CAMKK2Q96RR4 588 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 TOR3AQ9H497 397 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 MOCS1Q9NZB8 636 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 ATP10DQ9P241 1426 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 TRHDEQ9UKU6 1024 aa4.08□□□□□ -1.76
HMGB3P11-201ENST00000440127 RGPD8O14715 1765 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 NFAT5O94916 1531 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 ABLIM3O94929 683 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 HSP90AB1P08238 724 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 UBTFL1P0CB47 393 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 CTSSP25774 331 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 APOBEC3AP31941 199 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 BMPR1AP36894 532 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 SLC5A3P53794 718 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 NANOS3P60323 173 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 TMPRSS15P98073 1019 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 ITKQ08881 620 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 FSTL1Q12841 308 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 UBE4AQ14139 1066 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 ATP2B3Q16720 1220 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 ANO4Q32M45 955 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 PITRM1Q5JRX3 1037 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 SYDE2Q5VT97 1194 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 NXNQ6DKJ4 435 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 BTNL9Q6UXG8 535 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 ZNF627Q7L945 461 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 GPRIN1Q7Z2K8 1008 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 C14orf80Q86SX3 495 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 CHPFQ8IZ52 775 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 MYO1HQ8N1T3 1032 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 MSL3Q8N5Y2 521 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 CNTD1Q8N815 330 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 OTUD7AQ8TE49 926 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 SLC9A6Q92581 669 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 FATE1Q969F0 183 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 UHRF1Q96T88 793 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 LSM14BQ9BX40 385 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 CPEB1Q9BZB8 566 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 LRRCC1Q9C099 1032 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 USP44Q9H0E7 712 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 BCO1Q9HAY6 547 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 AKIP1Q9NQ31 210 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 TMPRSS11EQ9UL52 423 aa4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 LRRFIP2Q9Y608 721 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 VIRMAQ69YN4 1812 aaKnown RBP4.07□□□□□ -1.76
HMGB3P11-201ENST00000440127 SLIT3O75094 1523 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 C1orf167Q5SNV9 1468 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 MST1RQ04912 1400 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 NCAPD2Q15021 1401 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 NCOA3Q9Y6Q9 1424 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 TNKSO95271 1327 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 PNMA6EA0A0J9YXQ4 647 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 E2F8A0AVK6 867 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 TBKBP1A7MCY6 615 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 K7ESF4 209 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 PRPF3O43395 683 aaKnown RBP4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 KCNQ3O43525 872 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 CAND2O75155 1236 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 TMEM127O75204 238 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 EIF3JO75822 258 aaKnown RBP4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 ENDOD1O94919 500 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 REC8O95072 547 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 IL2RBP14784 551 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 PDE1AP54750 535 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 PER3P56645 1201 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 GUCY1B3Q02153 619 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 NHLH2Q02577 135 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 RABEP1Q15276 862 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 MST1LQ2TV78 715 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 MUM1L1Q5H9M0 696 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 BEND3Q5T5X7 828 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 FAM102BQ5T8I3 360 aa4.06□□□□□ -1.76
HMGB3P11-201ENST00000440127 STRIP1Q5VSL9 837 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms