RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TTC9BQ8N6N2 239 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 C1orf127Q8N9H9 656 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 IQUBQ8NA54 791 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 CACTINQ8WUQ7 758 aaKnown RBP17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 DEPDC1BQ8WUY9 529 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 ZSWIM3Q96MP5 696 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 SLC27A5Q9Y2P5 690 aa17.56■□□□□ 0.4
SNRPD3-204ENST00000439775 SCN1AP35498 2009 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 COL4A3Q01955 1670 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 EIF3DO15371 548 aaKnown RBP eCLIP17.55■□□□□ 0.45e-6■□□□□ 8.5
SNRPD3-204ENST00000439775 FGF19O95750 216 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 F13A1P00488 732 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 GJA1P17302 382 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 TUFMP49411 452 aaKnown RBP17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 TEAD2Q15562 447 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 ATL3Q6DD88 541 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 VITQ6UXI7 678 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 TPRG1Q6ZUI0 275 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 ITIH5Q86UX2 942 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 C1orf210Q8IVY1 113 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 GPD1LQ8N335 351 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 LRRC52Q8N7C0 313 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 ZSCAN18Q8TBC5 510 aaPredicted RBP17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 SPPL2BQ8TCT7 592 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 E2F7Q96AV8 911 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 DHX58Q96C10 678 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 TRMT61BQ9BVS5 477 aaKnown RBP17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 LTB4R2Q9NPC1 389 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 TRPV5Q9NQA5 729 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 ITGA11Q9UKX5 1188 aa17.55■□□□□ 0.4
SNRPD3-204ENST00000439775 A0A1W2PRU2 124 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 ITGB3P05106 788 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 PSMC3P17980 439 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 MAGEA9P43362 315 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 ASIC1P78348 528 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 GRM2Q14416 872 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 ASCL5Q7RTU5 278 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 DNAJB7Q7Z6W7 309 aaPredicted RBP17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 GLIS3Q8NEA6 775 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 CXorf38Q8TB03 319 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 IRF7Q92985 503 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 NELL2Q99435 816 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 BCO2Q9BYV7 579 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 SLITRK6Q9H5Y7 841 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 BRD9Q9H8M2 597 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 HEBP1Q9NRV9 189 aa17.54■□□□□ 0.4
SNRPD3-204ENST00000439775 UBE4BO95155 1302 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 COL4A2P08572 1712 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 SOAT2O75908 522 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 ATF6P18850 670 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 UBXN2BQ14CS0 331 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 VEPH1Q14D04 833 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 MGAT5BQ3V5L5 792 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 ZNF852Q6ZMS4 543 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 DCP1BQ8IZD4 617 aaKnown RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 TMEM86AQ8N2M4 240 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 PDCL2Q8N4E4 241 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 SPATA18Q8TC71 538 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 HPS3Q969F9 1004 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 SEPT5Q99719 369 aaPredicted RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 C7orf25Q9BPX7 421 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 PCIF1Q9H4Z3 704 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 GDAP2Q9NXN4 497 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 AGAP1Q9UPQ3 857 aa17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 MRPS17Q9Y2R5 130 aaKnown RBP17.53■□□□□ 0.4
SNRPD3-204ENST00000439775 NCANO14594 1321 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 FAM170BA6NMN3 283 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 LRRN2O75325 713 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 TMEM191BP0C7N4 346 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 TARSP26639 723 aaKnown RBP17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 HOXD13P35453 343 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 VIPR2P41587 438 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 RPS9P46781 194 aaKnown RBP17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 TSPY1Q01534 308 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 EHHADHQ08426 723 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 GAREM2Q75VX8 874 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 LRRTM3Q86VH5 581 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 MFSD6LQ8IWD5 586 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 CSGALNACT2Q8N6G5 542 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 ZNF507Q8TCN5 953 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 CLDN23Q96B33 292 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 MKNK1Q9BUB5 465 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 MTMR12Q9C0I1 747 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 SEMA4AQ9H3S1 761 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 KIAA1586Q9HCI6 787 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 SIX4Q9UIU6 781 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms