RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DR1Q01658 176 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 TMEM62Q0P6H9 643 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 INCA1Q0VD86 236 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 SIX1Q15475 284 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 TRADDQ15628 312 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 FSCN1Q16658 493 aaKnown RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 ALS2CLQ60I27 953 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 PHLDB2Q86SQ0 1253 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 SLC4A11Q8NBS3 891 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 ELOVL4Q9GZR5 314 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 IP6K2Q9UHH9 426 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
SMAD3-202ENST00000439724 UTP11Q9Y3A2 253 aaKnown RBP12.5□□□□□ -0.41
SMAD3-202ENST00000439724 C17orf102A2RUQ5 167 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 GOLGA6BA6NDN3 693 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TMEM191CA6NGB0 347 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 AGPSO00116 658 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 POLR3GO15318 223 aaPredicted RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 CA12O43570 354 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 DUSP11O75319 330 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 SYF2O95926 243 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 FAM153BP0C7A2 387 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 GNAT1P11488 350 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 CTGFP29279 349 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 PTGIRP43119 386 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 FNTAP49354 379 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 YARSP54577 528 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 CDH8P55286 799 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 SNX17Q15036 470 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TERF2Q15554 542 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 FAM153CQ494X1 144 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 DENND1BQ6P3S1 775 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 DNAJC24Q6P3W2 148 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 ADAT2Q7Z6V5 191 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 JAMLQ86YT9 394 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 RHOT1Q8IXI2 618 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TMEM130Q8N3G9 435 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 NME8Q8N427 588 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 C3orf20Q8ND61 904 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 MAIP1Q8WWC4 291 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 DNAJB3Q8WWF6 145 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TMEM176AQ96HP8 235 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TSPAN18Q96SJ8 248 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 CELF4Q9BZC1 486 aaKnown RBP12.49□□□□□ -0.41
SMAD3-202ENST00000439724 FAM153AQ9UHL3 310 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 RASAL2Q9UJF2 1139 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 GINS2Q9Y248 185 aa12.49□□□□□ -0.41
SMAD3-202ENST00000439724 TREHO43280 583 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 RARAP10276 462 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 CYBAP13498 195 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 DRG2P55039 364 aaKnown RBP12.48□□□□□ -0.41
SMAD3-202ENST00000439724 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 DUPD1Q68J44 220 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 KATNAL2Q8IYT4 538 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 MAGOHBQ96A72 148 aaKnown RBP12.48□□□□□ -0.41
SMAD3-202ENST00000439724 HHIPL1Q96JK4 782 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 TWNKQ96RR1 684 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 ERP44Q9BS26 406 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 EIF2AQ9BY44 585 aaKnown RBP12.48□□□□□ -0.41
SMAD3-202ENST00000439724 LRRC19Q9H756 370 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 SNTG2Q9NY99 539 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 CNTN3Q9P232 1028 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 BARX2Q9UMQ3 279 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-202ENST00000439724 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMAD3-202ENST00000439724 SCN10AQ9Y5Y9 1956 aa12.48□□□□□ -0.41
SMAD3-202ENST00000439724 TCRBV7S2A1N4TA0A589 114 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 PODXLO00592 558 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 DAPK3O43293 454 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 HSF2BPO75031 334 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 VDRP11473 427 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 GBP1P32455 592 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-202ENST00000439724 GGCXP38435 758 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-202ENST00000439724 FCGRTP55899 365 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 GJA9P57773 515 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 TAS2R40P59535 323 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
SMAD3-202ENST00000439724 NKX3-2P78367 333 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 MYO1EQ12965 1108 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 PIGHQ14442 188 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-202ENST00000439724 PTPN20Q4JDL3 420 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 LRRC38Q5VT99 294 aa12.47□□□□□ -0.41
SMAD3-202ENST00000439724 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms