RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 NOCTQ9UK39 431 aaKnown RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 CCPG1Q9ULG6 757 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ALS2Q96Q42 1657 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 FAM237BA0A1B0GVD1 139 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 MEI4A8MW99 385 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 FCHO1O14526 889 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 RAB27AP51159 221 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 GABPAQ06546 454 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 RASA2Q15283 850 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SIX1Q15475 284 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 AOC3Q16853 763 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SLC45A4Q5BKX6 768 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 MFSD7Q6UXD7 560 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 ZCCHC9Q8N567 271 aaKnown RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ABTB1Q969K4 478 aaPredicted RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 MTBPQ96DY7 904 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 FAM81BQ96LP2 452 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 ANKRD27Q96NW4 1050 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 CENPKQ9BS16 269 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
COPB1-202ENST00000439561 MRPL11Q9Y3B7 192 aaKnown RBP9.53□□□□□ -0.88
COPB1-202ENST00000439561 LRRC42Q9Y546 428 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 SRCAPQ6ZRS2 3230 aa9.53□□□□□ -0.88
COPB1-202ENST00000439561 E7ENQ6 273 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 DNALI1O14645 258 aaPredicted RBP9.52□□□□□ -0.88
COPB1-202ENST00000439561 TBX10O75333 385 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 PROSCO94903 275 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 GSTT1P30711 240 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 AP2B1P63010 937 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 CCDC15Q0P6D6 951 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 PTK7Q13308 1070 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.88
COPB1-202ENST00000439561 C10orf82Q8WW14 230 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 SHC3Q92529 594 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 RBM41Q96IZ5 413 aaKnown RBP9.52□□□□□ -0.88
COPB1-202ENST00000439561 TUBB6Q9BUF5 446 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 FBXO28Q9NVF7 368 aa9.52□□□□□ -0.88
COPB1-202ENST00000439561 COL18A1P39060 1754 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 IQANK1A0A1B0GTG1 560 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 A0A1B0GVG6 124 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 A6NHS1 94 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 F5H423 210 aaPredicted RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 H7C0C1 242 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 GSC2O15499 205 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 MAP3K13O43283 966 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 SLC26A4O43511 780 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 CREB3O43889 395 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 P4HBP07237 508 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 PYGBP11216 843 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 YWHABP31946 246 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 QARSP47897 775 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 ATP5OP48047 213 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 BPIFB4P59827 614 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 DEUP1Q05D60 604 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 CASC4Q6P4E1 433 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 PRPF39Q86UA1 669 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 ALYREFQ86V81 257 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 HSPH1Q92598 858 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 ZNF184Q99676 751 aaPredicted RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 TMEM8AQ9HCN3 771 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 ZHX2Q9Y6X8 837 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 COL4A1P02462 1669 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 GNAZP19086 355 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 RPS6KA3P51812 740 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 MAP7Q14244 749 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 SEZ6Q53EL9 994 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 PIP4K2CQ8TBX8 421 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 PLEKHO2Q8TD55 490 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 CD101Q93033 1021 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 PRR11Q96HE9 360 aaPredicted RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 DMAC2Q9NW81 257 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 LGALS13Q9UHV8 139 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 XPO7Q9UIA9 1087 aaKnown RBP9.52□□□□□ -0.89
COPB1-202ENST00000439561 PCDHB2Q9Y5E7 798 aa9.52□□□□□ -0.89
COPB1-202ENST00000439561 DOCK2Q92608 1830 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 LRRIQ4A6NIV6 560 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 P4HA2O15460 535 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 STAM2O75886 525 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 BBOX1O75936 387 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 T-ENOLP0DO92 83 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 AMPD1P23109 780 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 RABGAP1LQ5R372 815 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 CYP4A22Q5TCH4 519 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 FAXCQ5TGI0 409 aa9.51□□□□□ -0.89
COPB1-202ENST00000439561 RINLQ6ZS11 566 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms