RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CFLARO15519 480 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 NDUFS2O75306 463 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 LGALS2P05162 132 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 EPHB2P29323 1055 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 CSE1LP55060 971 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 CEP68Q76N32 757 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEK1-201ENST00000439128 NPTX2P47972 431 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 CCT5P48643 541 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 TTC17Q96AE7 1141 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 OXCT1P55809 520 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 SLC26A7Q8TE54 656 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 RNPC3Q96LT9 517 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 FBXO10Q9UK96 956 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 RHOCP08134 193 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PLCL1Q15111 1095 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 ATG16L1Q676U5 607 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 COPS5Q92905 334 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 SLIT1O75093 1534 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 VCLP18206 1134 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 MAML1Q92585 1016 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 CDY2AQ9Y6F7 541 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 CAND2O75155 1236 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 KCNA2P16389 499 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 PSMC6P62333 389 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 SGCGQ13326 291 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 EPC2Q52LR7 807 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 CERS4Q9HA82 394 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 FAM198AQ9UFP1 575 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 ZMYND8Q9ULU4 1186 aaPredicted RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 TSPAN3O60637 253 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 CXCL8P10145 99 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 EPHB4P54760 987 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PDIA2Q13087 525 aaKnown RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PHKG1Q16816 387 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 SNX31Q8N9S9 440 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 EPS15L1Q9UBC2 864 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 DDX5P17844 614 aaKnown RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
NEK1-201ENST00000439128 IRAK1BP1Q5VVH5 260 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PHACTR4Q8IZ21 702 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PCDHGB4Q9UN71 923 aa12.68□□□□□ -0.38
NEK1-201ENST00000439128 PPFIA2O75334 1257 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 MED24O75448 989 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 GFAPP14136 432 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 FNDC3BQ53EP0 1204 aaKnown RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 GLE1Q53GS7 698 aaKnown RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 TMEM117Q9H0C3 514 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 AGRPO00253 132 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 SLC1A1P43005 524 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 FBXO47Q5MNV8 452 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 DDIASQ8IXT1 998 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 RSRC1Q96IZ7 334 aaKnown RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 ATP1A1P05023 1023 aaKnown RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 SMIM10L2AP0DMW4 78 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 SMIM10L2BP0DMW5 78 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 PKN3Q6P5Z2 889 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 RCOR2Q8IZ40 523 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
NEK1-201ENST00000439128 OSGEPL1Q9H4B0 414 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 USP32Q8NFA0 1604 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 EPB42P16452 691 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 ZBED8Q8IZ13 594 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 DNAJC7Q99615 494 aa12.67□□□□□ -0.38
NEK1-201ENST00000439128 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 AP3B1O00203 1094 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms