RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZBED2Q9BTP6 218 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 OSBPL8Q9BZF1 889 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 FBXL5Q9UKA1 691 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ALDH3A1P30838 453 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 PRKCIP41743 596 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 STILQ15468 1287 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 RGMBQ6NW40 437 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARHGEF18Q6ZSZ5 1173 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAM84AQ96KN4 292 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 DHX35Q9H5Z1 703 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 DDX56Q9NY93 547 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 WRAP73Q9P2S5 460 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 BCAR1P56945 870 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 KRT17Q04695 432 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 PPP1R13LQ8WUF5 828 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAM118BQ9BPY3 351 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 SAYSD1Q9NPB0 183 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 STAP1Q9ULZ2 295 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 EXOC1LA0A1B0GW35 172 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 TXNDC9O14530 226 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 INHBAP08476 426 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 TSPY1Q01534 308 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 GPS1Q13098 491 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 PIGHQ14442 188 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 AMHR2Q16671 573 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 MEI1Q5TIA1 1274 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 CENPUQ71F23 418 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ATL2Q8NHH9 583 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 PYROXD1Q8WU10 500 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZSWIM1Q9BR11 485 aa12.2□□□□□ -0.46
TRAPPC9-202ENST00000438773 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 A0A0A6YYK5 440 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 H0Y3Z8 333 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 GOLGA8MH3BSY2 632 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 PJA2O43164 708 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 MAFO75444 373 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 GJB1P08034 283 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ITGA4P13612 1032 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 HIRAP54198 1017 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ITKQ08881 620 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARL13BQ3SXY8 428 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 C6orf163Q5TEZ5 329 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 IQSEC1Q6DN90 963 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 NOP9Q86U38 636 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 KCNV2Q8TDN2 545 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 UBQLN1Q9UMX0 589 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 PHF2O75151 1096 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 CPP00450 1065 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 PMS2P54278 862 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 DNAJB3Q8WWF6 145 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 MTIF3Q9H2K0 278 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 TPX2Q9ULW0 747 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 HMGB1P1B2RPK0 211 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 CAPN15O75808 1086 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 RTP1P59025 263 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 TMED2Q15363 201 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 GPR142Q7Z601 462 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZNF606Q8WXB4 792 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 SH3GL2Q99962 352 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
TRAPPC9-202ENST00000438773 SMTNL2Q2TAL5 461 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 CCDC38Q502W7 563 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 HP1BP3Q5SSJ5 553 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 JAMLQ86YT9 394 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 DNAAF3Q8N9W5 541 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 GLT1D1Q96MS3 346 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 WDR91A4D1P6 747 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 CREB3O43889 395 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 RAP1GAPP47736 663 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 NME3Q13232 169 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 LRRC14Q15048 493 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 IRF2BP2Q7Z5L9 587 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 STMN2Q93045 179 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 MCUR1Q96AQ8 359 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 THPOP40225 353 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 EPM2AIP1Q7L775 607 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC13A5Q86YT5 568 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms