RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SCARA3Q6AZY7 606 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 DCP1BQ8IZD4 617 aaKnown RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 GJD3Q8N144 294 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 SLC7A14Q8TBB6 771 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 NELFBQ8WX92 580 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 EEF2KMTQ96G04 330 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 NECAB3Q96P71 396 aaPredicted RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 MMS19Q96T76 1030 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 L1RE1Q9UN81 338 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 NR2E1Q9Y466 385 aa17.58■□□□□ 0.4
CTSD-205ENST00000438213 MTCL1Q9Y4B5 1905 aaKnown RBP17.58■□□□□ 0.4
CTSD-205ENST00000438213 XIRP2A4UGR9 3374 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 TRIM49BA6NDI0 452 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 CLSTN1O94985 981 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 LRG1P02750 347 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 GTF2H1P32780 548 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 PMS1P54277 932 aaKnown RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 MYL6P60660 151 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 TNNC1P63316 161 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 TSPY1Q01534 308 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ZP2Q05996 745 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 PAK1Q13153 545 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 NCOA4Q13772 614 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 WDR72Q3MJ13 1102 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ZACNQ401N2 412 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 TDRD10Q5VZ19 366 aaKnown RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 SV2AQ7L0J3 742 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ZC3H3Q8IXZ2 948 aaKnown RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 TAF4BQ92750 862 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ZNF707Q96C28 371 aaPredicted RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 RPGRIP1Q96KN7 1286 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 CEP63Q96MT8 703 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ACBD6Q9BR61 282 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 ZCWPW1Q9H0M4 648 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 POMKQ9H5K3 350 aa17.57■□□□□ 0.4
CTSD-205ENST00000438213 METTL14Q9HCE5 456 aaKnown RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 SPTBN5Q9NRC6 3674 aaKnown RBP17.57■□□□□ 0.4
CTSD-205ENST00000438213 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
CTSD-205ENST00000438213 POU2F2P09086 479 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 OR4Q2P0C623 313 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 P4HA1P13674 534 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 PCSK1P29120 753 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 SOWAHAQ2M3V2 549 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 LIMS2Q7Z4I7 341 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 ADGRF2Q8IZF7 708 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 MLKLQ8NB16 471 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 C2orf15Q8WU43 125 aaKnown RBP17.56■□□□□ 0.4
CTSD-205ENST00000438213 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 WDR6Q9NNW5 1121 aaKnown RBP17.56■□□□□ 0.4
CTSD-205ENST00000438213 DDX43Q9NXZ2 648 aaKnown RBP17.56■□□□□ 0.4
CTSD-205ENST00000438213 ARMCX3Q9UH62 379 aaPredicted RBP17.56■□□□□ 0.4
CTSD-205ENST00000438213 POLIQ9UNA4 740 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 CTNND2Q9UQB3 1225 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 PLXNA3P51805 1871 aa17.56■□□□□ 0.4
CTSD-205ENST00000438213 TNFRSF10AO00220 468 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 GABRDO14764 452 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 CCL16O15467 120 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 SEC24AO95486 1093 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 MBD3O95983 291 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 TRIM49P0CI25 452 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 TRIM49CP0CI26 452 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 GCLMP48507 274 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 ZNF699Q32M78 642 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 SLC39A12Q504Y0 691 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 ZNF667Q5HYK9 610 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 TTI2Q6NXR4 508 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 OTOP3Q7RTS5 596 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 FRMD5Q7Z6J6 570 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 ELMOD1Q8N336 334 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 CCDC150Q8NCX0 1101 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 OR10T2Q8NGX3 314 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 ACSF2Q96CM8 615 aaPredicted RBP17.55■□□□□ 0.4
CTSD-205ENST00000438213 RTP3Q9BQQ7 232 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 IMPG2Q9BZV3 1241 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 XYLT2Q9H1B5 865 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 SNX25Q9H3E2 840 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 TMEM8AQ9HCN3 771 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 HSFX1Q9UBD0 423 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 NXF1Q9UBU9 619 aaKnown RBP17.55■□□□□ 0.4
CTSD-205ENST00000438213 CDH22Q9UJ99 828 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 USTQ9Y2C2 406 aa17.55■□□□□ 0.4
CTSD-205ENST00000438213 LOC730098B7Z3J9 87 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 TACC1O75410 805 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 VNN1O95497 513 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 GNA14O95837 355 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 HLA-DRAP01903 254 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 PTPN2P17706 415 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 WARSP23381 471 aaKnown RBP17.54■□□□□ 0.4
CTSD-205ENST00000438213 GNL1P36915 607 aaPredicted RBP17.54■□□□□ 0.4
CTSD-205ENST00000438213 PIK3CAP42336 1068 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 ALDH1A3P47895 512 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 TUFMP49411 452 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms