RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SLC26A2P50443 739 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 GOLPH3Q9H4A6 298 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 PEX19P40855 299 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 NPEPPSP55786 919 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 TMEM259Q4ZIN3 620 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 C16orf89Q6UX73 402 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 ANKMY2Q8IV38 441 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 MRPL1Q9BYD6 325 aaKnown RBP16.58■□□□□ 0.25
PTPN13-204ENST00000436978 CDYLQ9Y232 598 aa16.58■□□□□ 0.25
PTPN13-204ENST00000436978 FDFT1P37268 417 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 C10orf120Q5SQS8 335 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 CDH16O75309 829 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 SPRP35270 261 aaPredicted RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 CAP2P40123 477 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 EHD4Q9H223 541 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 UBQLN1Q9UMX0 589 aaKnown RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 RUBCNLQ9H714 662 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 GARTP22102 1010 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 SNX31Q8N9S9 440 aa16.58■□□□□ 0.24
PTPN13-204ENST00000436978 C20orf96Q9NUD7 363 aaPredicted RBP16.58■□□□□ 0.24
PTPN13-204ENST00000436978 BACE1P56817 501 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 MTA1Q13330 715 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 SLC11A2P49281 568 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 HIC1Q14526 733 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ERO1BQ86YB8 467 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 PCSK9Q8NBP7 692 aaKnown RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 VIPAS39Q9H9C1 493 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 LTN1O94822 1766 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ANXA9O76027 345 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 THPOP40225 353 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 PLEKHH3Q7Z736 793 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ZNF555Q8NEP9 628 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 FEZF2Q8TBJ5 459 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 HPS3Q969F9 1004 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 PSD3Q9NYI0 1048 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 SUPT3HB4E1H0 165 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 CDH2P19022 906 aaPredicted RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 EIF2B5Q13144 721 aaKnown RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 AGAP3Q96P47 875 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 FOXD4Q12950 439 aaPredicted RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 CUL2Q13617 745 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 PTRHD1Q6GMV3 140 aaKnown RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 KDELC2Q7Z4H8 507 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 GIMAP4Q9NUV9 329 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 CD274Q9NZQ7 290 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ADAM21Q9UKJ8 722 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 KIAA1257Q9ULG3 409 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 KRT4P19013 534 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 AARS2Q5JTZ9 985 aaKnown RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 TAGAPQ8N103 731 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 POLD3Q15054 466 aaPredicted RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 ZC2HC1CQ53FD0 456 aaPredicted RBP16.57■□□□□ 0.24
PTPN13-204ENST00000436978 RABGAP1LQ5R372 815 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 GPR63Q9BZJ6 419 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 NDEL1Q9GZM8 345 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 SLC25A13Q9UJS0 675 aa16.57■□□□□ 0.24
PTPN13-204ENST00000436978 CLASP2O75122 1294 aaKnown RBP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 PCNX4Q63HM2 1172 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 CDH18Q13634 790 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 Q4G0T1 1027 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 FAM161BQ96MY7 647 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 NAGPAQ9UK23 515 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 ITGB3P05106 788 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 MAGEA9P43362 315 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 PRKCQQ04759 706 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 ABHD8Q96I13 439 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 NR1H4Q96RI1 486 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 METTL5Q9NRN9 209 aaKnown RBP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 FAM49BQ9NUQ9 324 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 HMBSP08397 361 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 TMEM132BQ14DG7 1078 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 TIGD7Q6NT04 549 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 LATS2Q9NRM7 1088 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 ESYT3A0FGR9 886 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 TMEM253P0C7T8 217 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 AP1ARQ63HQ0 302 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 LRRIQ3A6PVS8 624 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-204ENST00000436978 ARMC6Q6NXE6 501 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 PCYOX1LQ8NBM8 494 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 CMTM5Q96DZ9 223 aa16.56■□□□□ 0.24
PTPN13-204ENST00000436978 ZC3H11AO75152 810 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPN13-204ENST00000436978 CHGBP05060 677 aa16.55■□□□□ 0.24
PTPN13-204ENST00000436978 PPP3CCP48454 512 aa16.55■□□□□ 0.24
PTPN13-204ENST00000436978 PLD1Q13393 1074 aa16.55■□□□□ 0.24
PTPN13-204ENST00000436978 BFSP2Q13515 415 aa16.55■□□□□ 0.24
PTPN13-204ENST00000436978 MLXIPLQ9NP71 852 aa16.55■□□□□ 0.24
PTPN13-204ENST00000436978 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms