RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ABCD1P33897 745 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MATR3P43243 847 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ALDH1A3P47895 512 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ATXN1P54253 815 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 NRLP54845 237 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ARHGAP8P85298 464 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CCINQ13939 588 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DSTYKQ6XUX3 929 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DNAJB7Q7Z6W7 309 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RAD54LQ92698 747 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SLC27A5Q9Y2P5 690 aa11.87□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SLC38A8A6NNN8 435 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TISP43B9A030 160 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LRP3O75074 770 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 FAM13AO94988 1023 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 BMP15O95972 392 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GABRR2P28476 465 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 HOXA6P31267 233 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CXCL12P48061 93 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SOX9P48436 509 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LRRC32Q14392 662 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TMEM132DQ14C87 1099 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LAIR1Q6GTX8 287 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 Q6ZS52 159 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ITIH5Q86UX2 942 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RALGPS2Q86X27 583 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MYCT1Q8N699 235 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CALML4Q96GE6 196 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LPIN3Q9BQK8 851 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ASB7Q9H672 318 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GMEB2Q9UKD1 530 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 WDR87Q6ZQQ6 2873 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TICRRQ7Z2Z1 1910 aa11.86□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZFHX4Q86UP3 3567 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ANKRD63C9JTQ0 380 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 H3BQV1 296 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RETP07949 1114 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 NMT1P30419 496 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LONP1P36776 959 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 UBA7P41226 1012 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DMWDQ09019 674 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 MCM6Q14566 821 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ARHGAP29Q52LW3 1261 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GPR158Q5T848 1215 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TMEM150AQ86TG1 271 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CSGALNACT1Q8TDX6 532 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 C2orf15Q8WU43 125 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZFYVE19Q96K21 471 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 RTKNQ9BST9 563 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 STRA6Q9BX79 667 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ATXN3LQ9H3M9 355 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 C2orf42Q9NWW7 574 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 GTSE1Q9NYZ3 720 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CDV3Q9UKY7 258 aaKnown RBP11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DSEQ9UL01 958 aa11.85□□□□□ -0.51
SPTLC1P4-201ENST00000435997 HRO43593 1189 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CDC25CP30307 473 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ADSSP30520 456 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CNR2P34972 360 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TUFMP49411 452 aaKnown RBP11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ACOT2P49753 483 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TAF6P49848 677 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CYP4F8P98187 520 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 TNK2Q07912 1038 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SLC39A12Q504Y0 691 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZC2HC1CQ53FD0 456 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 DGKKQ5KSL6 1271 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LRRTM3Q86VH5 581 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 LONP2Q86WA8 852 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 YAF2Q8IY57 180 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SYNPOQ8N3V7 929 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 BPIFB1Q8TDL5 484 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SEPT5Q99719 369 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 ZMYM5Q9UJ78 669 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 KIF26AQ9ULI4 1882 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 SPTBN2O15020 2390 aa11.84□□□□□ -0.51
SPTLC1P4-201ENST00000435997 CHURC1-FNTBB4DL54 471 aa11.83□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CYB561D2O14569 222 aa11.83□□□□□ -0.52
SPTLC1P4-201ENST00000435997 HAPLN1P10915 354 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms