RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PHF13Q86YI8 300 aaPredicted RBP11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 TRIM11Q96F44 468 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 CGRRF1Q99675 332 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 KDM4CQ9H3R0 1056 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 NAALADL1Q9UQQ1 740 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 DOCK1Q14185 1865 aa11.02□□□□□ -0.65
CLSTN1-203ENST00000435891 SNX3O60493 162 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ATF7P17544 494 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 NAMPTP43490 491 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 C11orf91Q3C1V1 193 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ZFYVE27Q5T4F4 411 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 LIN9Q5TKA1 542 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ZNF365Q70YC5 407 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 FEZF2Q8TBJ5 459 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 DYDC1Q8WWB3 177 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 MTMR12Q9C0I1 747 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 PPP1R1BQ9UD71 204 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ATG7O95352 703 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 BRAFP15056 766 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 MMP8P22894 467 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 OAZ1P54368 228 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 FAM182AQ5T1J6 154 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 GRK7Q8WTQ7 553 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 SLC7A3Q8WY07 619 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 CDHR1Q96JP9 859 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 MCEEQ96PE7 176 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 SAMD15Q9P1V8 674 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 TJP2Q9UDY2 1190 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 CNTN6Q9UQ52 1028 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 FAM189A1O60320 539 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 PIGRP01833 764 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 UBA1P22314 1058 aaKnown RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 MYL6P60660 151 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 TGFB2P61812 414 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ENPEPQ07075 957 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 NUGGCQ68CJ6 796 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 CAPN12Q6ZSI9 719 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 EXD1Q8NHP7 514 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 ITFG2Q969R8 447 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 STMN4Q9H169 189 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 C10orf88Q9H8K7 445 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 HOMER3Q9NSC5 361 aa11.01□□□□□ -0.65
CLSTN1-203ENST00000435891 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 ZBTB7AO95365 584 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 WEE2P0C1S8 567 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 ZNF132P52740 706 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 CYP4A22Q5TCH4 519 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 SCARA5Q6ZMJ2 495 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 SYDE1Q6ZW31 735 aaPredicted RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 WDTC1Q8N5D0 677 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 MAIP1Q8WWC4 291 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 TFAP2BQ92481 460 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 STAMBPL1Q96FJ0 436 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 C12orf42Q96LP6 360 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 RBM15Q96T37 977 aaKnown RBP eCLIP11□□□□□ -0.654e-6■■□□□ 13.2
CLSTN1-203ENST00000435891 AS3MTQ9HBK9 375 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 MRPL47Q9HD33 250 aaKnown RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 SAE1Q9UBE0 346 aaPredicted RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 DYNC1LI1Q9Y6G9 523 aaKnown RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 TMEM191CA6NGB0 347 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 H0YCG3 227 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 SMIM24O75264 130 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 BANF1O75531 89 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 OAS1P00973 400 aaKnown RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 TMEM191BP0C7N4 346 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 MAN1A1P33908 653 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 XRCC4Q13426 336 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 STXBP2Q15833 593 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 DALRD3Q5D0E6 543 aaKnown RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 TRPM8Q7Z2W7 1104 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 TRIM50Q86XT4 487 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 UBR7Q8N806 425 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 ANKS4BQ8N8V4 417 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 TRPM4Q8TD43 1214 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 SLITRK1Q96PX8 696 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 ZCWPW1Q9H0M4 648 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 TCRBV5S1A1TA0A578 114 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 LIASO43766 372 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 PIAS1O75925 651 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 GJB1P08034 283 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 MARK3P27448 753 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 GCAP28676 217 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
CLSTN1-203ENST00000435891 ITIH4Q14624 930 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 DCAF15Q66K64 600 aa11□□□□□ -0.65
CLSTN1-203ENST00000435891 TRIM68Q6AZZ1 485 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms