RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SYNPOQ8N3V7 929 aa12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 PLIN2Q99541 437 aa12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 MMTAG2Q9BU76 263 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 TASP1Q9H6P5 420 aa12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 THG1LQ9NWX6 298 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-207ENST00000435083 PPEF2O14830 753 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 PRAMEF12O95522 483 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 ODC1P11926 461 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 TYMPP19971 482 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 GCNAQ96QF7 691 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 LPIN3Q9BQK8 851 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 SMG9Q9H0W8 520 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 ANGPTL2Q9UKU9 493 aa12.59□□□□□ -0.39
CHRNA1-207ENST00000435083 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 LAD1O00515 517 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 RPP40O75818 363 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 ZNF806P0C7X5 589 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 CCDC192P0DO97 292 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 U2AF2P26368 475 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 PRPHP41219 470 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 LIG4P49917 911 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 VEPH1Q14D04 833 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 PTPAQ15257 358 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 TAF12Q16514 161 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 KYAT1Q16773 422 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 MGAT5BQ3V5L5 792 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 SLC39A12Q504Y0 691 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 PKN3Q6P5Z2 889 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 GAB3Q8WWW8 586 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 SLC8A2Q9UPR5 921 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 GREB1Q4ZG55 1949 aa12.58□□□□□ -0.4
CHRNA1-207ENST00000435083 H0YCG3 227 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 OGTO15294 1046 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 CDC25CP30307 473 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 TUFMP49411 452 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 MCM2P49736 904 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 LIMK1P53667 647 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 LILRA4P59901 499 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 SPATA1Q5VX52 437 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 JADE1Q6IE81 842 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 OR10T2Q8NGX3 314 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 LOXL4Q96JB6 756 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 PNMA5Q96PV4 448 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 SLC46A2Q9BY10 475 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 RXFP3Q9NSD7 469 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 LARSQ9P2J5 1176 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 HSFX1Q9UBD0 423 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 ANK1P16157 1881 aa12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 MAP1BP46821 2468 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-207ENST00000435083 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 ATG13O75143 517 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 EPN2O95208 641 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 ATF6P18850 670 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 WEE1P30291 646 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 SLC12A3P55017 1021 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 NCKAP1LP55160 1127 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 STPG1Q5TH74 334 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 CCDC163A0A0D9SF12 145 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 TM4SF5O14894 197 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 PAX3P23760 479 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 PMLP29590 882 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 RUNX3Q13761 415 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 TMEM196Q5HYL7 178 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 HYIQ5T013 277 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 C9orf57Q5W0N0 161 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 METTL23Q86XA0 190 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 CMTM8Q8IZV2 173 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 THEM5Q8N1Q8 247 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 ZCWPW1Q9H0M4 648 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 EBF3Q9H4W6 596 aa12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 POLR3BQ9NW08 1133 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-207ENST00000435083 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms