RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 CTHP32929 405 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 SOX9P48436 509 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 ZNF131P52739 623 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 PLCB2Q00722 1185 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
PRKDC-203ENST00000432581 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 LPAL2Q16609 132 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 GPR158Q5T848 1215 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 C9orf57Q5W0N0 161 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 LONP2Q86WA8 852 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 SYNPOQ8N3V7 929 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 NETO1Q8TDF5 533 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 GCNAQ96QF7 691 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 MKNK1Q9BUB5 465 aa16.13■□□□□ 0.17
PRKDC-203ENST00000432581 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
PRKDC-203ENST00000432581 CHURC1-FNTBB4DL54 471 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 PIRO00625 290 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 TRAK2O60296 914 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 CDC25CP30307 473 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 UBA7P41226 1012 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 FNTBP49356 437 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 SMARCB1Q12824 385 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 TMEM132DQ14C87 1099 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 TTC9BQ8N6N2 239 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 TMEM209Q96SK2 561 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 SEPT5Q99719 369 aaPredicted RBP16.12■□□□□ 0.17
PRKDC-203ENST00000432581 ZCWPW1Q9H0M4 648 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 ASB7Q9H672 318 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 TASP1Q9H6P5 420 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 RBM12Q9NTZ6 932 aaKnown RBP16.12■□□□□ 0.17
PRKDC-203ENST00000432581 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 ACACBO00763 2458 aa16.12■□□□□ 0.17
PRKDC-203ENST00000432581 ANO9A1A5B4 782 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 K7ESF4 209 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 FOXD2O60548 495 aaPredicted RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 SOAT2O75908 522 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 KRT18P05783 430 aaKnown RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 HOXA6P31267 233 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 RABEP1Q15276 862 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 SLC39A12Q504Y0 691 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 TXNDC11Q6PKC3 985 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 Q6ZS52 159 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 METTL23Q86XA0 190 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 THEM5Q8N1Q8 247 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 OR10T2Q8NGX3 314 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 C2orf15Q8WU43 125 aaKnown RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 LRRC3BQ96PB8 259 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 THG1LQ9NWX6 298 aaKnown RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 C2CD2Q9Y426 696 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 PDCD11Q14690 1871 aaKnown RBP16.11■□□□□ 0.17
PRKDC-203ENST00000432581 TICRRQ7Z2Z1 1910 aa16.11■□□□□ 0.17
PRKDC-203ENST00000432581 SLC30A4O14863 429 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 HRO43593 1189 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 BMP15O95972 392 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 NFICP08651 508 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 MCM2P49736 904 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 GTF2BQ00403 316 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 POU5F1Q01860 360 aaKnown RBP16.1■□□□□ 0.17
PRKDC-203ENST00000432581 DMWDQ09019 674 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CCINQ13939 588 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 DHX8Q14562 1220 aaKnown RBP16.1■□□□□ 0.17
PRKDC-203ENST00000432581 PON2Q15165 354 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 PTPAQ15257 358 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 TAF12Q16514 161 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CSRP2Q16527 193 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 MGAT5BQ3V5L5 792 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 GPIHBP1Q8IV16 184 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 RASSF8Q8NHQ8 419 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 TTC8Q8TAM2 541 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 ZFYVE19Q96K21 471 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CNTNAP3BQ96NU0 1288 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CNTNAP3Q9BZ76 1288 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 ZHX3Q9H4I2 956 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 SEMA4GQ9NTN9 838 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CACNA1BQ00975 2339 aa16.1■□□□□ 0.17
PRKDC-203ENST00000432581 CYB561D2O14569 222 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 PRAMEF12O95522 483 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 GJB2P29033 226 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
PRKDC-203ENST00000432581 TAF6P49848 677 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 CYP4F8P98187 520 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 ITPRIPL2Q3MIP1 535 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 ADALQ6DHV7 355 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 SLFN12LQ6IEE8 588 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 PRR23CQ6ZRP0 262 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 RAD54LQ92698 747 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms