RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 CCHCR1Q8TD31 782 aa14.08□□□□□ -0.16
SNRNP200-202ENST00000429650 ACAD9Q9H845 621 aa14.08□□□□□ -0.16
SNRNP200-202ENST00000429650 ECT2Q9H8V3 914 aa14.08□□□□□ -0.16
SNRNP200-202ENST00000429650 NOD2Q9HC29 1040 aa14.08□□□□□ -0.16
SNRNP200-202ENST00000429650 SAYSD1Q9NPB0 183 aa14.08□□□□□ -0.16
SNRNP200-202ENST00000429650 TJP3O95049 919 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ZSCAN5DPP0CG00 497 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 GCAP28676 217 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 SLC8A1P32418 973 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 MAP2K2P36507 400 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 BNIP1Q12981 228 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 EAPPQ56P03 285 aaPredicted RBP14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ANKRD35Q8N283 1001 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 CFAP57Q96MR6 1250 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 AS3MTQ9HBK9 375 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF148Q9UQR1 794 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 IVNS1ABPQ9Y6Y0 642 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 TCRBV5S1A1TA0A578 114 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ATG7O95352 703 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 HARSP12081 509 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 PTPRAP18433 802 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 TAC1P20366 129 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 MCL1Q07820 350 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 PNMA8AQ86V59 439 aaPredicted RBP14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ALLCQ8N6M5 410 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF513Q8N8E2 541 aaPredicted RBP14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 TEX13BQ9BXU2 312 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 BAIAP2L1Q9UHR4 511 aa14.07□□□□□ -0.16
SNRNP200-202ENST00000429650 EXOC1LA0A1B0GW35 172 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 FAM47DPA6NHR8 397 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 F8VP50 259 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 ATP2A1O14983 1001 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 ETS1P14921 441 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 NQO1P15559 274 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 FOXN2P32314 431 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 ARSEP51690 589 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 WDR4P57081 412 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 COPS2P61201 443 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 TGFB2P61812 414 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 KCNJ2P63252 427 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 OGDHQ02218 1023 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 RIPK1Q13546 671 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 MTFR1Q15390 333 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 SPOCD1Q6ZMY3 1216 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 FITM2Q8N6M3 262 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 RNF217Q8TC41 542 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 RMDN2Q96LZ7 410 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 MCEEQ96PE7 176 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 IMPG2Q9BZV3 1241 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 RXFP1Q9HBX9 757 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 HACL1Q9UJ83 578 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 CST3P01034 146 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 CALB1P05937 261 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 PECAM1P16284 738 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 GPS1Q13098 491 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 FASTKD3Q14CZ7 662 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 E2F5Q15329 346 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 TXNRD3NBQ6F5E7 133 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 DNAJC24Q6P3W2 148 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 TRABD2AQ86V40 505 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 TTC25Q96NG3 672 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 TMEM134Q9H6X4 195 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 MCM8Q9UJA3 840 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
SNRNP200-202ENST00000429650 MGAT5Q09328 741 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 CAPSQ13938 189 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF268Q14587 947 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 OASLQ15646 514 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 TDRPQ86YL5 185 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 BRSK2Q8IWQ3 736 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 WRNIP1Q96S55 665 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 PICK1Q9NRD5 415 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 ZNF112Q9UJU3 913 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 DRG1Q9Y295 367 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 hCG_1818297A0A087WSY0 165 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 LSM8O95777 96 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 ICAM3P32942 547 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 PTPN7P35236 360 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 TNFSF9P41273 254 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 IL9RQ01113 521 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 FSTL1Q12841 308 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 NR1H3Q13133 447 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 NEDD9Q14511 834 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 PRAMEF18Q5VWM3 479 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 DCAF15Q66K64 600 aa14.05□□□□□ -0.16
SNRNP200-202ENST00000429650 RNF43Q68DV7 783 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms