RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 HPS3Q969F9 1004 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 CEP44Q9C0F1 390 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 FAIMQ9NVQ4 179 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 TRNAU1APQ9NX07 287 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 GCNT4Q9P109 453 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 COQ6Q9Y2Z9 468 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZHX2Q9Y6X8 837 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 UMODL1Q5DID0 1318 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 PODXLO00592 558 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 OXSR1O95747 527 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 RFX1P22670 979 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 PPARGP37231 505 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 PLCB3Q01970 1234 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 TRIM16LQ309B1 348 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 MAGEB18Q96M61 343 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 FAM20AQ96MK3 541 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 RRN3Q9NYV6 651 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 ASIC3Q9UHC3 531 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 FEM1BQ9UK73 627 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 NOTOA8MTQ0 251 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 BTNL10A8MVZ5 291 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 SPOPO43791 374 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 MYCLP12524 364 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 KLRC1P26715 233 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 NPEPPSP55786 919 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 SPP2Q13103 211 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 DNAJC3Q13217 504 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 PUS10Q3MIT2 529 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 GALNTL6Q49A17 601 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC51AQ86UW1 340 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 GJB6O95452 261 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 NUP107P57740 925 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 DHX34Q14147 1143 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 KYNUQ16719 465 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 PRR16Q569H4 304 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 TREML1Q86YW5 311 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 NUP93Q8N1F7 819 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 ZFRQ96KR1 1074 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 TRMUO75648 421 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 NDUFB10O96000 172 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 PABPC4LP0CB38 370 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 MAN1A1P33908 653 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 FKBP1CQ5VVH2 108 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 CEP295NLQ96MC4 621 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 ANO3Q9BYT9 981 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 SCN7AQ01118 1682 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 WNT10BO00744 389 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 TBX3O15119 743 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 EXOC3O60645 756 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 TPPPO94811 219 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 ARL1P40616 181 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 GRM1Q13255 1194 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 TMEM119Q4V9L6 283 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 BTNL9Q6UXG8 535 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 NSL1Q96IY1 281 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 PHTF1Q9UMS5 762 aa15.14■□□□□ 0.01
SYNGAP1-203ENST00000428982 GGPS1O95749 300 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 MSL3P1P0C860 447 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ACAP1Q15027 740 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 TMED2Q15363 201 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 TRIP10Q15642 601 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 QRICH1Q2TAL8 776 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 TMEM63BQ5T3F8 832 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 PACS1Q6VY07 963 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 HIPK4Q8NE63 616 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 SLC26A7Q8TE54 656 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 BTBD10Q9BSF8 475 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 RIOX1Q9H6W3 641 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 IKBKGQ9Y6K9 419 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 A8MXQ7 604 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 RBAK-RBAKDNI3L0D1 243 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 KRT10P13645 584 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 CHN2P52757 468 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 MTFR1Q15390 333 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 UBE2SQ16763 222 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ECHDC2Q86YB7 292 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 GATA6Q92908 595 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 PKD2L1Q9P0L9 805 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 SYNGAP1Q96PV0 1343 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 ARHGEF35A5YM69 484 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 RASA4BC9J798 803 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 RASA4O43374 803 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 CYTH3O43739 400 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 NR3C1P04150 777 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 EIF2S1P05198 315 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 SHMT1P34896 483 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 KLHL35Q6PF15 583 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 RFFLQ8WZ73 363 aa15.13■□□□□ 0.01
SYNGAP1-203ENST00000428982 CCDC127Q96BQ5 260 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms