RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ITIH5Q86UX2 942 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 WDR5BQ86VZ2 330 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 TMEM209Q96SK2 561 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 PLIN2Q99541 437 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 OBP2AQ9NY56 170 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 ZFHX4Q86UP3 3567 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 ATG2BQ96BY7 2078 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 ANK1P16157 1881 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 GREB1Q4ZG55 1949 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 ODC1P11926 461 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 LIG4P49917 911 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 CDR1P51861 262 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 CYP4F8P98187 520 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 CACNB1Q02641 598 aaPredicted RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 CCINQ13939 588 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 ENOX2Q16206 610 aaKnown RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 KYAT1Q16773 422 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 AASDHQ4L235 1098 aaPredicted RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 IL31Q6EBC2 164 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 BPIFB1Q8TDL5 484 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 DDX1Q92499 740 aaKnown RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 FAM212AQ96EL1 285 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 SENP8Q96LD8 212 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 GCNAQ96QF7 691 aa19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 SEPT5Q99719 369 aaPredicted RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 RPF1Q9H9Y2 349 aaKnown RBP19.87■□□□□ 0.77
UPK3BP1-201ENST00000428678 NPHP3-ACAD11A0A0J9YXS1 232 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 H0YCG3 227 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 HNRNPDLO14979 420 aaKnown RBP19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 AXIN1O15169 862 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 HOXA6P31267 233 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 LILRA4P59901 499 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 VEPH1Q14D04 833 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 ITPRIPL2Q3MIP1 535 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 SYNPOQ8N3V7 929 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 SYT2Q8N9I0 419 aaPredicted RBP19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 CDK5RAP3Q96JB5 506 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 PNMA5Q96PV4 448 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 LPIN3Q9BQK8 851 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 TASP1Q9H6P5 420 aa19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 LARSQ9P2J5 1176 aaKnown RBP19.86■□□□□ 0.77
UPK3BP1-201ENST00000428678 EXTL3O43909 919 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 PLA2G4BP0C869 781 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 PXNP49023 591 aaPredicted RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 SLC12A3P55017 1021 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 NCKAP1LP55160 1127 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 SF3A2Q15428 464 aaKnown RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 CCDC6Q16204 474 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 MGAT5BQ3V5L5 792 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 SLC39A12Q504Y0 691 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 HYIQ5T013 277 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 SPATA1Q5VX52 437 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 C12orf50Q8NA57 414 aaPredicted RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 OR10T2Q8NGX3 314 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 SMG9Q9H0W8 520 aaKnown RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 ARRDC1-AS1Q9H2J1 176 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 KCND2Q9NZV8 630 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 TSC2P49815 1807 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 FRYQ5TBA9 3013 aa19.85■□□□□ 0.77
UPK3BP1-201ENST00000428678 OGTO15294 1046 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 CDC25CP30307 473 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 TUFMP49411 452 aaKnown RBP19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 MCM2P49736 904 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 TAF12Q16514 161 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 JADE1Q6IE81 842 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 PKN3Q6P5Z2 889 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 HSFX1Q9UBD0 423 aa19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 ZNF638Q14966 1978 aaKnown RBP19.84■□□□□ 0.77
UPK3BP1-201ENST00000428678 SCN1AP35498 2009 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 FAM189A1O60320 539 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 RPP40O75818 363 aaKnown RBP19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 WEE1P30291 646 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 PTPAQ15257 358 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 CACNA2D4Q7Z3S7 1137 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 GIPC2Q8TF65 315 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 GAB3Q8WWW8 586 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 TSPAN18Q96SJ8 248 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 MSTO1Q9BUK6 570 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 SH2B1Q9NRF2 756 aaPredicted RBP19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 GKN1Q9NS71 199 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 ANGPTL2Q9UKU9 493 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 TBX20Q9UMR3 447 aa19.83■□□□□ 0.77
UPK3BP1-201ENST00000428678 VWA3AA6NCI4 1184 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 K7ENM7 598 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 NFICP08651 508 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 CCDC192P0DO97 292 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 ATF6P18850 670 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 PAX3P23760 479 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 LIMK1P53667 647 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 GRSF1Q12849 480 aaKnown RBP eCLIP19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 TMEM132DQ14C87 1099 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 ARSHQ5FYA8 562 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 C9orf57Q5W0N0 161 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 MCTP1Q6DN14 999 aa19.82■□□□□ 0.76
UPK3BP1-201ENST00000428678 KBTBD6Q86V97 674 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms