RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 GRM2Q14416 872 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 FAM78AQ5JUQ0 283 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 FAM26FQ5R3K3 315 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 RESP18Q5W5W9 173 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 TMC8Q8IU68 726 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 DTWD2Q8NBA8 298 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 BORCS6Q96GS4 357 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 C7orf25Q9BPX7 421 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 MTMR12Q9C0I1 747 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 ZCWPW1Q9H0M4 648 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 IRF2BPLQ9H1B7 796 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 MAGEF1Q9HAY2 307 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 CFAP45Q9UL16 551 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 AGAP1Q9UPQ3 857 aa19.85■□□□□ 0.77
PSPC1-202ENST00000427943 PTPRJQ12913 1337 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 EIF3DO15371 548 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■■■■□ 22.9
PSPC1-202ENST00000427943 DCNP07585 359 aaKnown RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 TMEM191BP0C7N4 346 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 AFMP43652 599 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 BFSP1Q12934 665 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 TEAD2Q15562 447 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 MLF2Q15773 248 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 ATL3Q6DD88 541 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 PHLDB3Q6NSJ2 640 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 CNNM4Q6P4Q7 775 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 UNC13DQ70J99 1090 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 EPM2AIP1Q7L775 607 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 NELFCDQ8IXH7 590 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 GRAMD1CQ8IYS0 662 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 THEM5Q8N1Q8 247 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 LEMD2Q8NC56 503 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 SHKBP1Q8TBC3 707 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 CACTINQ8WUQ7 758 aaKnown RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 ELSPBP1Q96BH3 223 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 CHAMP1Q96JM3 812 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 ZSWIM3Q96MP5 696 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 ASB16Q96NS5 453 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 SEPT5Q99719 369 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 LRRC3Q9BY71 257 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 SLITRK6Q9H5Y7 841 aa19.84■□□□□ 0.77
PSPC1-202ENST00000427943 KIF26AQ9ULI4 1882 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-202ENST00000427943 A0A1W2PRU2 124 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 LRRN2O75325 713 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 MICAL2O94851 1124 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 KRT19P08727 400 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 PNPLA4P41247 253 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 MGAT5BQ3V5L5 792 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 CBWD2Q8IUF1 395 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 CSGALNACT2Q8N6G5 542 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 PJA1Q8NG27 643 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 LPIN3Q9BQK8 851 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 ZFP14Q9HCL3 533 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 ZNF334Q9HCZ1 680 aaPredicted RBP19.83■□□□□ 0.77
PSPC1-202ENST00000427943 HSPBP1Q9NZL4 362 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 ITGA11Q9UKX5 1188 aa19.83■□□□□ 0.77
PSPC1-202ENST00000427943 NCANO14594 1321 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 KIAA0391O15091 583 aaKnown RBP19.82■□□□□ 0.76
PSPC1-202ENST00000427943 STARD6P59095 220 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 PFKPQ01813 784 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 CUL4BQ13620 913 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 ANGPT1Q15389 498 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 SLC44A4Q53GD3 710 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 LRRTM3Q86VH5 581 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 CXorf38Q8TB03 319 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 ZSCAN18Q8TBC5 510 aaPredicted RBP19.82■□□□□ 0.76
PSPC1-202ENST00000427943 ZNF507Q8TCN5 953 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 AGPAT3Q9NRZ7 376 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 ABI2Q9NYB9 513 aaPredicted RBP19.82■□□□□ 0.76
PSPC1-202ENST00000427943 SERTAD1Q9UHV2 236 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 SIX4Q9UIU6 781 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 RCOR1Q9UKL0 485 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 L1RE1Q9UN81 338 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 SIT1Q9Y3P8 196 aa19.82■□□□□ 0.76
PSPC1-202ENST00000427943 UBE4BO95155 1302 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 PTPRDP23468 1912 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 ZNF233A6NK53 670 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 ATF6P18850 670 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 CD72P21854 359 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 VIPR2P41587 438 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 EHHADHQ08426 723 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 STXBP5Q5T5C0 1151 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 VITQ6UXI7 678 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 TPRG1Q6ZUI0 275 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 PDCL2Q8N4E4 241 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 LRRC52Q8N7C0 313 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 OR5B17Q8NGF7 314 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 FAM200AQ8TCP9 573 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 SMARCD2Q92925 531 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 PSMG2Q969U7 264 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 SHDQ96IW2 340 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 ANKRD36BP1Q96IX9 119 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 SLC39A2Q9NP94 309 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 TMLHEQ9NVH6 421 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 DLGAP2Q9P1A6 1054 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
PSPC1-202ENST00000427943 USP34Q70CQ2 3546 aa19.8■□□□□ 0.76
PSPC1-202ENST00000427943 FANCMQ8IYD8 2048 aa19.8■□□□□ 0.76
PSPC1-202ENST00000427943 CLIC2O15247 247 aa19.8■□□□□ 0.76
PSPC1-202ENST00000427943 TGFB1I1O43294 461 aa19.8■□□□□ 0.76
PSPC1-202ENST00000427943 HUS1O60921 280 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms