RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 A0A087WUV0 522 aaPredicted RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 EFNA5P52803 228 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 ERAP2Q6P179 960 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 TTC13Q8NBP0 860 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 CEP41Q9BYV8 373 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 UBP1Q9NZI7 540 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 MID2Q9UJV3 735 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 RRP15Q9Y3B9 282 aaKnown RBP13.78□□□□□ -0.2
SPG11-202ENST00000427534 M0QYT0 321 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 FKBP9O95302 570 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 CSF1RP07333 972 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 E2F4Q16254 413 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 OSMRQ99650 979 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 APOL2Q9BQE5 337 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 MTMR12Q9C0I1 747 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 MFSD1Q9H3U5 465 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 PIF1Q9H611 641 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 DOK6Q6PKX4 331 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 SPACA7Q96KW9 195 aa13.78□□□□□ -0.2
SPG11-202ENST00000427534 MYMKA6NI61 221 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 C19orf81C9J6K1 198 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 PODXLO00592 558 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 SLC9A1P19634 815 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 SNX17Q15036 470 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 INPP5DQ92835 1189 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 RPRD1AQ96P16 312 aaPredicted RBP13.77□□□□□ -0.2
SPG11-202ENST00000427534 CHP1Q99653 195 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 TEX12Q9BXU0 123 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 NPHS2Q9NP85 383 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 DDX56Q9NY93 547 aaKnown RBP13.77□□□□□ -0.2
SPG11-202ENST00000427534 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 CKBP12277 381 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 RGS2P41220 211 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 C16orf59Q7L2K0 433 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 SHCBP1Q8NEM2 672 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 IRX2Q9BZI1 471 aaPredicted RBP13.77□□□□□ -0.2
SPG11-202ENST00000427534 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.2
SPG11-202ENST00000427534 ECT2Q9H8V3 914 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.2
SPG11-202ENST00000427534 ZNF263O14978 683 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 ENO3P13929 434 aaPredicted RBP13.77□□□□□ -0.21
SPG11-202ENST00000427534 CYTH1Q15438 398 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 NOTUMQ6P988 496 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 ZSCAN32Q9NX65 697 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.21
SPG11-202ENST00000427534 BEX3Q00994 111 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 NFIAQ12857 509 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 PLEKHH3Q7Z736 793 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 PHACTR4Q8IZ21 702 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 ANGPTL2Q9UKU9 493 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 PPIEQ9UNP9 301 aaKnown RBP13.77□□□□□ -0.21
SPG11-202ENST00000427534 DTNAQ9Y4J8 743 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 N6AMT1Q9Y5N5 214 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 ZBTB39O15060 712 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 KLHL38Q2WGJ6 581 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 DNAJB3Q8WWF6 145 aa13.77□□□□□ -0.21
SPG11-202ENST00000427534 PDHXO00330 501 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 AP1G2O75843 785 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 KLRC2P26717 231 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 KCNV1Q6PIU1 500 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 FBXO32Q969P5 355 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 PDLIM2Q96JY6 352 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 ZNF512BQ96KM6 892 aaPredicted RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 LMTK2Q8IWU2 1503 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 CYP7B1O75881 506 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 RHOBTB1O94844 696 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 PCNAP12004 261 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 FSCBQ5H9T9 825 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 NT5C1AQ9BXI3 368 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 STXBP3O00186 592 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 RASA1P20936 1047 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 RBM23Q86U06 439 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 ZFYVE1Q9HBF4 777 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms