RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 POU1F1P28069 291 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 ETFBP38117 255 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 OTUD4Q01804 1114 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 C11orf88Q6PI97 169 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 MYO3BQ8WXR4 1341 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 DDHD2O94830 711 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 ROGDIQ9GZN7 287 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 SH3GLB2Q9NR46 395 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 UBAP1Q9NZ09 502 aa13.1□□□□□ -0.31
HDLBP-214ENST00000427183 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
HDLBP-214ENST00000427183 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 AVPR1AP37288 418 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 COG2Q14746 738 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.316e-8■■■□□ 17.2
HDLBP-214ENST00000427183 MCEEQ96PE7 176 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 CHP1Q99653 195 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 SH2D3AQ9BRG2 576 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 RTN2O75298 545 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 TFE3P19532 575 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 FEN1P39748 380 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 LIFRP42702 1097 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 MROH9Q5TGP6 573 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 OTOAQ7RTW8 1153 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 MDM1Q8TC05 714 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 TSPAN17Q96FV3 270 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 SENP7Q9BQF6 1050 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 LXNQ9BS40 222 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 FAM129AQ9BZQ8 928 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 CLASP2O75122 1294 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 ZNF23P17027 643 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 SOX6P35712 828 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 RCN1Q15293 331 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 NFIL3Q16649 462 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 KYNUQ16719 465 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 NMD3Q96D46 503 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 NSL1Q96IY1 281 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 MUC3BQ9H195 1237 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 TRIM13O60858 407 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 PHF2O75151 1096 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 PSMC6P62333 389 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 DSG1Q02413 1049 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 TWF1Q12792 350 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 FAM167AQ96KS9 214 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 LSP1P33241 339 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 SERPINB5P36952 375 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 NUMBP49757 651 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 IPMKQ8NFU5 416 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 CALML6Q8TD86 181 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 PNKPQ96T60 521 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 MANSC1Q9H8J5 431 aa13.09□□□□□ -0.31
HDLBP-214ENST00000427183 MTO1Q9Y2Z2 717 aaKnown RBP13.09□□□□□ -0.31
HDLBP-214ENST00000427183 DNALI1O14645 258 aaPredicted RBP13.08□□□□□ -0.31
HDLBP-214ENST00000427183 CHRM3P20309 590 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.31
HDLBP-214ENST00000427183 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.31
HDLBP-214ENST00000427183 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 RSBN1Q5VWQ0 802 aaPredicted RBP13.08□□□□□ -0.31
HDLBP-214ENST00000427183 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.31
HDLBP-214ENST00000427183 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 SNX12Q9UMY4 172 aa13.08□□□□□ -0.31
HDLBP-214ENST00000427183 SKAP2O75563 359 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 QARSP47897 775 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 ZCWPW2Q504Y3 356 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 RCOR2Q8IZ40 523 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 FMR1NBQ8N0W7 255 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 UTP6Q9NYH9 597 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 MRPL39Q9NYK5 338 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 VHLP40337 213 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 CSTF3Q12996 717 aaKnown RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 ZRANB3Q5FWF4 1079 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-214ENST00000427183 SH3TC2Q8TF17 1288 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 KIF2CQ99661 725 aa13.08□□□□□ -0.32
HDLBP-214ENST00000427183 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms